Query= MSMg01no370_a19.b1 MSMg01no370_a19.b1 CHROMAT_FILE:
MSMg01no370_a19.b1 PHD_FILE: MSMg01no370_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:58 2005
(502 letters)
>mm_chr10_18408904_18409806
Length = 903
Score = 845 bits (437), Expect = 0.0
Identities = 479/499 (95%), Gaps = 11/499 (2%)
Strand = Plus / Plus
Query: 5 gaattctagaac-ttcacagtaaacgctgagagcttacatctgtgcttaacttctgatca 63
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctagaacattcacagtaaatgctgagagcttacatctgtgcttaacttctgatca 264
Query: 64 tagtgggagagttattagggtagagaagttctcaagtatgtccaatggtacagcacctag 123
||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 265 tagtgggagagttattaggttagagtagttctcaagtatgtccaatggtacagtacctag 324
Query: 124 acatggtgatacttatgaaaagaaattaatagataatatggaaacctcatctcacaaaga 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 acatggtgatacttatgaaaagaagttaatagataatatggaaacctcatctcacaaaga 384
Query: 184 gtaaataaactaaagaaaaaatttacagttatggacttctgcatgtttgcttcttcttta 243
|| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaataaacgaaagaaaaaatttacagttatggacttctgcatgtttgcttcttcttta 444
Query: 244 taatcatctgcctaaggtagttatttcaaagggtaaaagagaaagaaggaaaatataatt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taatcatctgcctaaggtagttatttcaaagggtaaaagagaaagaaggaaaatataatt 504
Query: 304 agtattgtataaatgtgtgtgccaggtagaaaaatcttatctcagtcaacattagcagca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agtattgtataaatgtgtgtgccaggtagaaaaatcttatctcagtcaacattagcagca 564
Query: 364 ggaaggaaagctgcctaaaaacaaattacttaggagaaccacacacggctggtagagtat 423
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 565 ggaaggaaagctgcctaaaaacaaattacttaggagaaccacacacggttggtagagtat 624
Query: 424 gctgtagtatgctataaggttgttagactcaaccccaacaccagcagttagggagttata 483
|||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 625 gctgta----------aggttgttagactcaaccccaacaccagcagttaaggagttata 674
Query: 484 tacaatttccaacagcagt 502
|||||||||||||||||||
Sbjct: 675 tacaatttccaacagcagt 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space: 439356
Effective search space used: 439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_a19.g1 MSMg01no370_a19.g1 CHROMAT_FILE:
MSMg01no370_a19.g1 PHD_FILE: MSMg01no370_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:58 2005
(395 letters)
>mm_chr10_18460489_18461283
Length = 795
Score = 756 bits (391), Expect = 0.0
Identities = 394/395 (99%)
Strand = Plus / Minus
Query: 1 tttaccccgctggcttagagccctgccctccagactctcttagagcacttagtactttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tttaccccgctggcttagagccctgccctccagactctcttagagcacttagtactttgg 536
Query: 61 agttggcacacgcatacctatgacggaaggatcattgagaaacatcttgagtacaaagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 agttggcacacgcatacctatgacggaaggatcattgagaaacatcttgagtacaaagac 476
Query: 121 aaggcaagttaaagctgacccccctccccccaccacacagtttacttgctccatccatgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aaggcaagttaaagctgacccccctccccccaccacacagtttacttgctccatccatgg 416
Query: 181 aaggttcattggaagaataatggggtttgggctgatatgaaattatacagtcttaaggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaggttcattggaagaataatggggtttgggctgatatgaaattatacagtcttaaggac 356
Query: 241 cttgacttggtctttgtgaattgtctgtcatgctctacacggattttgggtgtccataaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 cttgacttggtctttgtgaattgtctgtcatgctctacacggattttgggtgtccataaa 296
Query: 301 cttagaccatcttatcccctacttagactgtgttaggagaggggagtaacccttattcag 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 cttagaccatcttatctcctacttagactgtgttaggagaggggagtaacccttattcag 236
Query: 361 agtttcatggggggagcctggtgttgggattggtt 395
|||||||||||||||||||||||||||||||||||
Sbjct: 235 agtttcatggggggagcctggtgttgggattggtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
