Query= MSMg01no371_o04.b1 MSMg01no371_o04.b1 CHROMAT_FILE:
MSMg01no371_o04.b1 PHD_FILE: MSMg01no371_o04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:30 2005
(501 letters)
>mm_chr10_126789592_126790492
Length = 901
Score = 627 bits (324), Expect = 0.0
Identities = 339/344 (98%)
Strand = Plus / Minus
Query: 158 aagacaaaaaccaaagcaatttaaaaaattaaaaaataacaacccacacccccacacccc 217
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 aagacaaaaaccaaagcaaattaaaaaattaaaaaataacaacccacacccccacacccc 842
Query: 218 aaataagctgggtgctgatggcatacatctttaatgccaacactcaggaggcagaggcag 277
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 841 aaataagctgggtgctgatggcatacatctttaatgccaacattcaggaggcagaggcag 782
Query: 278 gtggagctctgtgagtccaaggccagcctggtctacagagcaagttccaggacagccagg 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gtggagctctgtgagtccaaggccagcctggtctacagagcaagttccaggacagccagg 722
Query: 338 gctacacaaagagagcctataatgggggtgggggaggtcagaagttgggagataactcag 397
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 721 gctacacaaagagagcctataatggggttgggggaggtcagatgttgggagataactcag 662
Query: 398 tagataaagctattgctttacaagcgcatggacctgcattagagtctccagagcccaggt 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tagataaagctattgctttacaagcgcatggacctgcattagagtctccagagcccaggt 602
Query: 458 agaagtgcaatcccagcgttgcagacactgggactcactggcca 501
|||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaaatgcaatcccagcgttgcagacactgggactcactggcca 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_o04.g1 MSMg01no371_o04.g1 CHROMAT_FILE:
MSMg01no371_o04.g1 PHD_FILE: MSMg01no371_o04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:30 2005
(572 letters)
>mm_chr10_126612891_126613862
Length = 972
Score = 1038 bits (537), Expect = 0.0
Identities = 564/573 (98%), Gaps = 2/573 (0%)
Strand = Plus / Plus
Query: 1 gaattccacactgggtcc-cctcccccatcaccttattcatcgaggcaggatctctcagt 59
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gaattccacactggg-cctcctcccccatcaccttattcatcgaggcaggatctctcagc 259
Query: 60 tgaacccagagctcttgggttcctgcccccatccctgccttctagacaggtcaccatacc 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgaacccaaagctcttgggttcctgcccccatccctgccttctagacaggtcaccatacc 319
Query: 120 catggagctggaggcttgaacccctgtgctaatgcttctgctttaaccactgagccatct 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catggacctggaggcttgaacccctgtgctaatgcttctgctttaaccactgagccatct 379
Query: 180 ccacagaatggtggcagtcccctttccacagtctctatgtgccccagcctgccttgagcc 239
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 ccacagaatggtggcagtcccctttccacagtcactatgtgccccagcctgccttgagcc 439
Query: 240 ccagacaaccctctgctctgtcagccttcctagttccagaactctgggtatgtaatacaa 299
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 ccagacaatcctctgctctgtcagccttcctagttccagaactctgggtatgtaatacaa 499
Query: 300 caccttgatgttactgtttttatttttaatcaggtctgaggcattgtagcttttgcttac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 caccttgatgttactgtttttatttttaatcaggtctgaggcattgtagcttttgcttac 559
Query: 360 ggccaacagaggtcctcatggagttccgttattgtctaaccctcctcttcataatcccat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggccaacagaggtcctcatggagttccgttattgtctaaccctcctcttcataatcccat 619
Query: 420 taccatcctggaatatgtagatgctaaatcctgggttatccacctgctccccactctctc 479
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 taccatcctggaatatgtagatgctaaatcctgggttatccacctgttccccactctctc 679
Query: 480 ctgccacccctgttgaatgtcccatcctttctcctcaccctctcaaggatacccttacct 539
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 680 ctgccacccctgttgaatgtcccatcctttctcctcatcctctcaaggatacccttacct 739
Query: 540 gtgtattcccaccagcatccactaataagctgg 572
|||||||||||||||||||||||||||||||||
Sbjct: 740 gtgtattcccaccagcatccactaataagctgg 772
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
