Query= MSMg01no372_d24.b1 MSMg01no372_d24.b1 CHROMAT_FILE:
MSMg01no372_d24.b1 PHD_FILE: MSMg01no372_d24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:57 2005
(448 letters)
>mm_chr10_79209671_79210518
Length = 848
Score = 752 bits (389), Expect = 0.0
Identities = 392/393 (99%)
Strand = Plus / Minus
Query: 56 aataaataaatctttaaaaaaacaaaaacaaaagcaaaaatggtgtgtgccaccacaccc 115
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 848 aataaataaatctttaaaaaaacaaaaacaaaagcaaaaacggtgtgtgccaccacaccc 789
Query: 116 agctctgagtttgtgtgtgtgtctgtttatctgtccgtttgcttgcccgactgcctgatt 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 agctctgagtttgtgtgtgtgtctgtttatctgtccgtttgcttgcccgactgcctgatt 729
Query: 176 gagacaaggttttatgtgcattttatgtgcttaaatttgaatccgcctgcctttacctcc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 gagacaaggttttatgtgcattttatgtgcttaaatttgaatccgcctgcctttacctcc 669
Query: 236 agagggctgggattataaacccaaagctctcactgatgcgctccagacagtagaagccct 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 agagggctgggattataaacccaaagctctcactgatgcgctccagacagtagaagccct 609
Query: 296 agtactgagaaaatgagcccaggtcctgtcttctcaggagggtactgtctgagctacaga 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 agtactgagaaaatgagcccaggtcctgtcttctcaggagggtactgtctgagctacaga 549
Query: 356 attagcctggaaaatttagtgagattctgtctcaaatataaaatgctggtgcgtgatagc 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 attagcctggaaaatttagtgagattctgtctcaaatataaaatgctggtgcgtgatagc 489
Query: 416 acatatctgtcatccggcacttcctgagctagg 448
|||||||||||||||||||||||||||||||||
Sbjct: 488 acatatctgtcatccggcacttcctgagctagg 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_d24.g1 MSMg01no372_d24.g1 CHROMAT_FILE:
MSMg01no372_d24.g1 PHD_FILE: MSMg01no372_d24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:57 2005
(391 letters)
>mm_chr10_79039822_79040612
Length = 791
Score = 692 bits (358), Expect = 0.0
Identities = 372/380 (97%), Gaps = 6/380 (1%)
Strand = Plus / Plus
Query: 1 gccagcctggtctacagagttccaggacagccagggctacacagagaaaccctgtctcan 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gccagcctggtctacagagttccaggacagccagggctacacagagaaaccctgtctca- 265
Query: 61 aaaaaaaaaaaaaaaaaaaaaaaaaagatgttgaaaaccaccttttaagagggtgaattg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 -----aaaaaaaaaaaaaaaaaaaaagatgttgaaaaccaccttttaagagggtgaattg 320
Query: 121 tgaagaagacatctcagttggtcacagcactcagaaagaagaccacagttaccagggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaagaagacatctcagttggtcacagcactcagaaagaagaccacagttaccagggaga 380
Query: 181 acatggtctttctccacctggggaagcggggagcctagtctgtgttcgctttatctctgg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 acatggtctttctccacctggggaagcggggagcctagtctgtgtccgctttatctctgg 440
Query: 241 gggttctatagggtgaggtataggagagactgcactgaggccctggggagagaaagtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggttctatagggtgaggtataggagagactgcactgaggccctggggagagaaagtaga 500
Query: 301 tccctgggacagagaaccacgtggaaacacagctgtgtgtgtgtccacaaggagctctct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tccctgggacagagaaccacgtggaaacacagctgtgtgtgtgtccacaaggagctctct 560
Query: 361 ttcaaaaggatcaacaaagc 380
|||||||||||||||||||
Sbjct: 561 ctcaaaaggatcaacaaagc 580
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
