Query= MSMg01no373_f23.b1 MSMg01no373_f23.b1 CHROMAT_FILE:
MSMg01no373_f23.b1 PHD_FILE: MSMg01no373_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:19 2005
(462 letters)
>mm_chr10_99399796_99400657
Length = 862
Score = 445 bits (230), Expect = e-129
Identities = 269/284 (94%), Gaps = 5/284 (1%)
Strand = Plus / Plus
Query: 1 acagagacaggagaatggtaacaaatt---gagcagcctggtctaacacagtgaattaca 57
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 200 acagagacaggagaatggtaacaaattcaagagcagcctggtctaacacagtgaattaca 259
Query: 58 agccagccaggactttatactgagactctgtctaaaaaaaaccaaaaagtcagaatatca 117
||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 260 agccagccaggactttatactgagactctgtctcaaaaaaa--aaaaagtcagactatca 317
Query: 118 atttaaatgaagttataaggaggcaaaaagtgaagctatagttttagacatcagactgtt 177
||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 318 atttatatgaagttataaggaggcaaaaagtgaagctatagctttagacatcaggctgtt 377
Query: 178 tccttggttgaatggagatgaagcattaaacattaaaaagaccattaggaaacatctgca 237
||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||
Sbjct: 378 tccttggttgaatagagatgaaacattaaacattcaaaaggccattaggaaacatctgca 437
Query: 238 atgatagaaataatcagcatgataattgaaatttatctgtcaat 281
||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 438 atgatagaaataatcagtatgataattgaaatttatctgtcaat 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 862
Length adjustment: 10
Effective length of query: 452
Effective length of database: 852
Effective search space: 385104
Effective search space used: 385104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_f23.g1 MSMg01no373_f23.g1 CHROMAT_FILE:
MSMg01no373_f23.g1 PHD_FILE: MSMg01no373_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:19 2005
(478 letters)
>mm_chr10_99573164_99574041
Length = 878
Score = 924 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Minus
Query: 1 tcctttcaatgctaggaatgcccccagacatttcaatgacaacattgggagcaaagtgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 tcctttcaatgctaggaatgcccccagacatttcaatgacaacattgggagcaaagtgac 619
Query: 61 acattatacacttagctggccttaaactgtctcaagaaacaatgtaagttatttaaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 acattatacacttagctggccttaaactgtctcaagaaacaatgtaagttatttaaataa 559
Query: 121 aaaaaaatccccagaaaccaaggattaaataaaataactgttgggaatttagctatttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aaaaaaatccccagaaaccaaggattaaataaaataactgttgggaatttagctatttaa 499
Query: 181 agttgttgagagctgcacacaggagtttctgtttctatggtcttcttcactggcccccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agttgttgagagctgcacacaggagtttctgtttctatggtcttcttcactggcccccac 439
Query: 241 ccacagtttaatttgttcaccatttgctatagctaagatttccaagaaaaaccttttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ccacagtttaatttgttcaccatttgctatagctaagatttccaagaaaaaccttttttc 379
Query: 301 ccccataagctcaaaaaagcatgttgtactgtcaagagtaacaaaaattgttcttgtatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ccccataagctcaaaaaagcatgttgtactgtcaagagtaacaaaaattgttcttgtatt 319
Query: 361 taactgccaaccaaagccttaagtctcacacgcatctgaaggtggaggtagggtgaatga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taactgccaaccaaagccttaagtctcacacgcatctgaaggtggaggtagggtgaatga 259
Query: 421 agagagcctataattcctattattaggtgcctcctgcctctcacggtcttatatgaag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 agagagcctataattcctattattaggtgcctcctgcctctcacggtcttatatgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
