Query= MSMg01no373_g20.b1 MSMg01no373_g20.b1 CHROMAT_FILE:
MSMg01no373_g20.b1 PHD_FILE: MSMg01no373_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:23 2005
(539 letters)
>mm_chr10_6777417_6778355
Length = 939
Score = 961 bits (497), Expect = 0.0
Identities = 524/533 (98%), Gaps = 2/533 (0%)
Strand = Plus / Plus
Query: 8 gaattctttggattcgcccaaccgtatcatagttggttgtcaatcagttatagattatca 67
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattctttggattcgtccaaccgtatcatagttggttgtcaatcagttatagattatca 267
Query: 68 tggcatgtctaccttccctccctccctctccccccatccttcctttccattgtataatgg 127
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tgacatgtctaccttccctccctccctctccccccatccttcctttccattgtataatgg 327
Query: 128 gcaaatgctctaccactgagatacattttgaccccgtttaaatattattttgagatagag 187
||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||
Sbjct: 328 gcaaatgctctaccactgagacacattttgaccccttttaaatattattttgagatagag 387
Query: 188 attcccttagatgctcagactggaatcaaacttcttgtcctacaacccagggtcctaagt 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 attcccttagatgctcagactggaatcaaacttcttgtcctacaacccagggtcctaagt 447
Query: 248 agctgaggccataggtgtaagtcactgtaagtgtctaaacttatcacagcaaacttaaca 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 agctgaggccataggtgtaagtcactgtaagtgtctaaacttatcacagcaaacttaaca 507
Query: 308 taggtcagtaaagatataagtttttaaaaatcacttcagaatgtttatagcattcttcat 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 taggtcagtaaagatataagtttttaaaaatcacttcagaatgtttatagcattcttcat 567
Query: 368 agtatattctagaaggacgttcactgacaacactggaaaaac-agaacccagtttggttt 426
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct: 568 agtatattctagaaggacgttcactgacaacactg-aaaaaccagaacccagtttggttt 626
Query: 427 gcagattccccaaagtagctccaacaattagcttctatttaaagagccaggccattagga 486
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 627 gcagattccccaaagtagctccaacaattagcttctacttaaagagccaggccattagga 686
Query: 487 agtggatcataataagatctcatgcaaattgtactgggtaggggtggggtggg 539
||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 687 agtagatcataataagatctcatgcaaattgtactgggcaggggtggggtggg 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_g20.g1 MSMg01no373_g20.g1 CHROMAT_FILE:
MSMg01no373_g20.g1 PHD_FILE: MSMg01no373_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:23 2005
(478 letters)
>mm_chr10_6958955_6959832
Length = 878
Score = 698 bits (361), Expect = 0.0
Identities = 376/381 (98%)
Strand = Plus / Minus
Query: 1 agtaaaatttgcttttcaaagttttgtgttatgaccaatgattcagttgagagtagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtaaaatttgcttttcaaagttttgtgttatgaccaatgattcagttgagagtagcaga 322
Query: 61 gaaatctattttcaggaggttagagtggactcaagatttacccatgagtcactgcttcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaaatctattttcaggaggttagagtggactcaagatttacccatgagtcactgcttcag 262
Query: 121 atcacattgcaagtgggtctgattctattgcccctggcccacccagaatcagcctagggc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 atcacattgcaagtgggtctgattctattgcctctggcccacccagaatcagcctagggc 202
Query: 181 tgtagttcttaacctgtcagttgtgacccctttggagttgactgaccctttcacaggggt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtagttcttaacctgtcagttgcgacccctttggagttgactgaccctttcacaggggt 142
Query: 241 cacctaagaccattggaaaacacagatatttacatcacgactcataaccatagcagttat 300
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 141 cacctaaggccattggaaaacacagatatttacatcacgactcataaccgtagcagttat 82
Query: 301 ggagtagcaacaaaaataatgttatggttgggatgtcaacacaacatgaggaactgtatt 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ggagtagcaacaaaaataacgttatggttgggatgtcaacacaacatgaggaactgtatt 22
Query: 361 aatgggtggcagcattgggga 381
|||||||||||||||||||||
Sbjct: 21 aatgggtggcagcattgggga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 878
Length adjustment: 10
Effective length of query: 468
Effective length of database: 868
Effective search space: 406224
Effective search space used: 406224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
