Query= MSMg01no373_p07.b1 MSMg01no373_p07.b1 CHROMAT_FILE:
MSMg01no373_p07.b1 PHD_FILE: MSMg01no373_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:01 2005
(512 letters)
>mm_chr10_39784119_39785030
Length = 912
Score = 853 bits (441), Expect = 0.0
Identities = 495/513 (96%), Gaps = 2/513 (0%)
Strand = Plus / Plus
Query: 1 gtcaagatggcactgggctcagccacagaggacagccagggtataaggaggggcagtcgg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 gtcaagatggcactgggctcagccacagaggacagccagggtataaggaggggcagtcag 260
Query: 61 agaacacaaacagctgcagagacttcacagctagggacgtggtggtgagccggcttgttg 120
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 261 agaacacaaacagctacagagacttcatagctagggacgtggtggtgagccggcttgttg 320
Query: 121 agggatctcacatttccacagctcacattgactaagacagaagagaggagaggaatgtga 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 agggatctcacatttccacagctcacattgactaagacagaggagaggagaggaatgtga 380
Query: 181 tcttttagtttactcttactacctggtgataaagtcttctcatggctaaataaccaactg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tcttttagtttactcttactacctggtgataaagtcttctcctggctaaataaccaactg 440
Query: 241 gtgtggttataggatctttcgccaatagcacattcacacaaacttggaaaaatagttca- 299
|||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtggttataggacctttcgtcaatagcacattcacacaaacttggaaaaatagttcag 500
Query: 300 agtgaacaaaggtaacagaagccagctgagcttggcatctgcaagccaacacagacttca 359
|||||||||||| || ||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 501 agtgaacaaaggcaagagaagccagctgagcttggcatctgcaagttaagacagacttca 560
Query: 360 cgctaacctcggaaaggatgagctcagctcactaccaagtccctaggattcagggcaaca 419
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgctaacctcggaaaggatgagatcagctcactaccaagtccctaggattcagggcaaca 620
Query: 420 gtaactttaccttttaaaaacgttcctggcaatgatatcaatacgccagattatcatata 479
||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 621 gtaacgttaccttttaaaa-cgttcctggcaatggtatcaatacgccagattatcatata 679
Query: 480 aacccttccaattagctctatttacccttgaat 512
||||||||||||||||||||||| |||||||||
Sbjct: 680 aacccttccaattagctctatttccccttgaat 712
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 912
Length adjustment: 10
Effective length of query: 502
Effective length of database: 902
Effective search space: 452804
Effective search space used: 452804
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_p07.g1 MSMg01no373_p07.g1 CHROMAT_FILE:
MSMg01no373_p07.g1 PHD_FILE: MSMg01no373_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:02 2005
(331 letters)
>mm_chr10_39964142_39964868
Length = 727
Score = 518 bits (268), Expect = e-151
Identities = 314/336 (93%), Gaps = 14/336 (4%)
Strand = Plus / Minus
Query: 1 actctgtagaccaggctggtcttgaactcagaaatccgcctgcctctgcctcacaagtgc 60
||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct: 624 actctgtagaccaggctggcctcgaactcagaaatcggcctgcctctgcctcacaagtgc 565
Query: 61 tgggattaaagttgtgtgccaccaccacacactggctaagtgaggtttttgttttgtttt 120
|||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 564 tgggattaaactcgtgtgccaccatcacacactggctaagtgaggtttttgttttgtttt 505
Query: 121 gtttgttgttattgttggaatcctgcttgataaatgtgagtaccgttcctgctgagttcc 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 gtttgttgttattgttggaatcctgcttgataaatgtgagtaccattcctgctgagttcc 445
Query: 181 tgtcatatgaggaaaatgtgtaacttgttctgaattgtgcttttttgttttttgtttttt 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 444 tgtcatatgaggaaaatgtgtaacttgttctgaattgtgctttttt-tttttt---tttt 389
Query: 241 ttacattttt-----cctaaaactaaaagggctaagagattccttgataagagagaaccg 295
||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 388 ttaca-----gaaagcctaaaactaaaagggctaagagattccttgagaagagagaaccg 334
Query: 296 aaactcactgagaacattaagaatgccatgctgatt 331
||||||||||||||||||||||||||||||||||||
Sbjct: 333 aaactcactgagaacattaagaatgccatgctgatt 298
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 727
Length adjustment: 9
Effective length of query: 322
Effective length of database: 718
Effective search space: 231196
Effective search space used: 231196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
