Query= MSMg01no374_e09.b1 MSMg01no374_e09.b1 CHROMAT_FILE:
MSMg01no374_e09.b1 PHD_FILE: MSMg01no374_e09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:28 2005
(490 letters)
>mm_chr10_39136684_39137574
Length = 891
Score = 855 bits (442), Expect = 0.0
Identities = 476/488 (97%), Gaps = 3/488 (0%)
Strand = Plus / Plus
Query: 5 gaattccacatgggtagaagaaagaaagtctagagaagaaaataattaaacgaaacccaa 64
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacatggg-agaaggaagaaagtctagagaagaaaataattaaacgaaacccaa 263
Query: 65 agcacacagcaagggaaactcagagtaatgaatgaaagcaagtaaacaaagaggcgaggc 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agcacacagcaaaggaaactcagagtaatgaatgaaagcaagtaaacaaagaggcgaggc 323
Query: 125 agggagatgacccagcacaggactgagtgtgaggtctggcacacaggcaagaggggcatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agggagatgacccagcacaggactgagtgtgaggtctggcacacaggcaagaggggcatg 383
Query: 185 ttgggcagccatgttcccagtttaaaaaaatagggcagcctctctgttctcttcagggtc 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgggcagccatgttcccagttaaaaaaaatagggcagcctctctgttctcttcagggtc 443
Query: 245 tcctctggatctcatacagattccactagacagtcctgccctggggaa--gagaggagct 302
||||||| |||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 444 gcctctggttctcatacagatcccactggacagtcctgccctggggaaaagagaggagcc 503
Query: 303 cttccagatgcctgagattgtgattgctgtcccaggagaaaggtcatttggaagtaggca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttccagatgcctgagattgtgattgctgtcccaggagaaaggtcatttggaagtaggca 563
Query: 363 cactcatttatcaccatccatatttgtcccctaatatgccatgaagaccagagggaagcg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cactcatttatcaccatccatatttgtcccctaatatgccatgaagaccagagggaagcg 623
Query: 423 tggtgaggtccagtggtgacagctcacggtgatgccagcccaggggctgtcactaaacac 482
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tggtgaggtccagtggtgagagctcacggtgatgccagcccaggggctgtcactaaacac 683
Query: 483 atgtctta 490
||||||||
Sbjct: 684 atgtctta 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 891
Length adjustment: 10
Effective length of query: 480
Effective length of database: 881
Effective search space: 422880
Effective search space used: 422880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_e09.g1 MSMg01no374_e09.g1 CHROMAT_FILE:
MSMg01no374_e09.g1 PHD_FILE: MSMg01no374_e09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:28 2005
(356 letters)
>mm_chr10_39259185_39259942
Length = 758
Score = 681 bits (352), Expect = 0.0
Identities = 356/358 (99%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 1 actccatttctgggaagcctgtacatactgcacagagagcagaaaagtgtgtctgcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 actccatttctgggaagcctgtacatactgcacagagagcagaaaagtgtgtctgcagag 411
Query: 61 agcgaggagaagggcagtgataagagctatgtccactgctgtacacagacagtgccaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 agcgaggagaagggcagtgataagagctatgtccactgctgtacacagacagtgccaata 351
Query: 121 aatgttccgtgctcatgagggctgtattcagtctttaggcccccatccccacagaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aatgttccgtgctcatgagggctgtattcagtctttaggcccccatccccacagaggaac 291
Query: 181 agcgagacc--tgttagtgatatccaggagaattgctaccaggattcatgtgagaactta 238
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agcgagacctgtgttagtgatatccaggagaattgctaccaggattcatgtgagaactta 231
Query: 239 tgtacatatgtgatgtcagacacaataatgatatataataaatataaataaaaaccatgt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgtacatatgtgatgtcagacacaataatgatatataataaatataaataaaaaccatgt 171
Query: 299 gcatgcagctcggggctgtggatagttcttttctttcttttttgggggtgggggtgag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gcatgcagctcggggctgtggatagttcttttctttcttttttgggggtgggggtgag 113
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 758
Length adjustment: 9
Effective length of query: 347
Effective length of database: 749
Effective search space: 259903
Effective search space used: 259903
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
