Query= MSMg01no374_f04.b1 MSMg01no374_f04.b1 CHROMAT_FILE:
MSMg01no374_f04.b1 PHD_FILE: MSMg01no374_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:31 2005
(619 letters)
>mm_chr10_118043112_118044134
Length = 1023
Score = 1062 bits (549), Expect = 0.0
Identities = 595/611 (97%), Gaps = 5/611 (0%)
Strand = Plus / Plus
Query: 5 gaattcatagggaagacttaatgatccaggatgcctacgaagatcataaagaggccagag 64
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatagggaagacttaatgattcgggatgcctacgaagatcataaagaggccagag 264
Query: 65 aagaggccagggaagctaagagagggtctgaaaaccatct-ctctccagcaagagtgagc 123
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 265 aagaggccagggaagctaagagagggtctgaaaaccatcttctctccggcaagagtgagc 324
Query: 124 tataagcaaagagctaagcatcatgggaagaatacatgcccttgaagctgctggtgtcac 183
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 325 tataagcaaagagctaagcatcatgggaggaatacatgcccttgaagctgctggagtcac 384
Query: 184 a--gacctgatcagaagtgctctacctgagtagggctgagggttccgaggaagtagaagg 241
| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 385 atagacctgatcagaagtgctctacctgagtagagctgagggttccgaggaagtagaagg 444
Query: 242 gactttccagggccagagaaaatccaggaagaagatgcggaatgaagctattggctgtca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gactttccagggccagagaaaatccaggaagaagatgcggaatgaagctattggctgtca 504
Query: 302 tgtcatgctttagtggttgtatgctgggctcagcccaaggcagtggtggggcatctgcat 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtcatgctttagtggttgtatgctgggctcagcccaaggcagtggtggggcatctgcag 564
Query: 362 caaggcctggaggctcactgaccgaagataataatgcaattttattgaggcatttaaaac 421
|||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
Sbjct: 565 caaggcctggaggctcactgaccgaagataataatgcatttttattgatgcatttaaatc 624
Query: 422 cagaaccc-ctgtgggatgatttcagccacttcaattaacaatgttcgtcattactacta 480
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cagaacccacagtgggatgatttcagccacttcaattaacaatgttcgtcattactacta 684
Query: 481 agactatagaacattttgtttttagaaaatgatgtgaaatttactgaatgtttatcctaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agactatagaacattttgtttttagaaaatgatgtgaaatttactgaatgtttatcctaa 744
Query: 541 tctatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 745 tctatctatctatctatctatctatctatctatctatctatctatctatc-atctatcta 803
Query: 601 tcatctatcta 611
|||||||||||
Sbjct: 804 tcatctatcta 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 97
Number of extensions: 29
Number of successful extensions: 29
Number of sequences better than 10.0: 1
Number of HSP's gapped: 23
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1023
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1013
Effective search space: 616917
Effective search space used: 616917
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_f04.g1 MSMg01no374_f04.g1 CHROMAT_FILE:
MSMg01no374_f04.g1 PHD_FILE: MSMg01no374_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:32 2005
(571 letters)
>mm_chr10_118107980_118108949
Length = 970
Score = 826 bits (427), Expect = 0.0
Identities = 460/471 (97%), Gaps = 2/471 (0%)
Strand = Plus / Minus
Query: 101 cttggatttaaatccagcaccgtaaactgatacttatacctgacatggttttcaggccat 160
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 970 cttggatttaaatccagcaccgtaaactgatacttatacctgacatggttatcaggccat 911
Query: 161 gaacctataactagagaggcaagagacagggaagaatctattactggtatattgcttaaa 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gaacctataactagagaggcaagagacagggaagaatctattactggtatattgcttaaa 851
Query: 221 ggacatagtaactaacagattcctaatgccttatcattatcttcatagttctatgcttct 280
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 850 ggacatagtaactaacggattcctaatgccttatcattatc-tcatagttctatgcttct 792
Query: 281 ctcaacttgtaggaggagcttagccaagcaggcccagttgcaatgctggcacatgtgtag 340
||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct: 791 ctcaacttgtaggaggagcttagccaagcagacccagttgcaatgctggcgcatgtgtag 732
Query: 341 ctgatacacccctcccagagccagcctaaaatctgctagcatgtctaaagatcactgata 400
|||||||| ||||||| ||||||||||||||||||| |||||||||||||||| || |||
Sbjct: 731 ctgataca-ccctcccggagccagcctaaaatctgccagcatgtctaaagatcgctaata 673
Query: 401 ccagttcgggtgatggagcaagccaatgagaaagagacagtgccacatctggctacttgg 460
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 ccagttcgggtgatggagcgagccaatgagaaagagacagtgccacatctggctacttgg 613
Query: 461 gagccaatgagatgcttggaggagggtataaagttttgcacagttcctgcaatataccag 520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gagccaatgagatgcttggaggagggtataaagttttgcacagttcctgcaatataccag 553
Query: 521 tctgcttttgccacttgcctgactcctggagtctgtgtcattgactctact 571
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tctgcttttgccacttgcctgactcctggagtctgtgtcattgactctact 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 970
Length adjustment: 10
Effective length of query: 561
Effective length of database: 960
Effective search space: 538560
Effective search space used: 538560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
