TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTGTTCTGTCTCTGAGCCCCATTTTTTAATGGGGTTGTTTGATTT
TCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCC
TATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTC
TTTGTCTTATTCACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCAT
TAGGTCCCATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTC
TGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACT
TTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCTTTGAT
CCATTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCA
TTCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTG
ACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGN
CTACTTGTCTGTCTCTATACCAGTACCATGCAGATTTTACCACAAATGCT
CTGGAGTAAAGCTTTAAGTCCGGCTTGGTGATTCCCCAAAAGGTCTTTTT
TTCCTTGTGAAAAGATTTTTGTTTCCTGGGTTTTTGGTTTTTCCAATGAA
TTTGTAAATGGCCCCTTCAATTTTTGAAGAAT

CGATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAGAACAGCCAAGGCTACACAGAGA
AACCATGTTTTGAAAAACCAAAAGACCCCAACCCAACCCAAACCAAACAC
GTACAAAAAACCCAAATAAACAAAACCAACCAACCAAAAACCCAAACTGC
ATTCCTGAACAGCAAGGGAAAATAAGTTCAAAAGATACTATTTATAATCA
TGAGAATTATGATTTATTATTATTTATAACATCAATGAGAAGGATAAGGG
TTTTAGGAGTAAATCTAACAAATTGTCAAGATCTTAGAGCAGCAGTTTTT
AACCTGTGCTTTGCCACCCCCTTGGCAAACTTCTGTCTCTAAAAATATCT
ACATTACTGTTCATAACAGGACAGGAGGAAAATTACAGTTATAAAGTACC
AACAGAATAATTTTATGTTTGGGGGTCACCAAAGCAGAAGAAAATATATT
AAAAAATAAATTAGGATGGAAAAAAAAATCTTAAAGAAAGAGGAAAGGCC
CTAACACAAAACCATGTTAAACTTGACAGCTTTGTGAGCTGAGAACCAAC
AGAAACAAAACAAAACAAACCCAACGGAACCAAGAAATATGTGTCATATA
ACACAAGTAACAAATGATAATTTAGTGTGTAGAATAAAACCATCTCCTAA
AAATCACTATGAGAAAGAAAAGAATCCCATACAAATGGGCACAACCAAAA
AGCTTCCCCACAAAAAGAAAAAACCCC

Query= MSMg01no374_j13.g1 MSMg01no374_j13.g1 CHROMAT_FILE:
MSMg01no374_j13.g1 PHD_FILE: MSMg01no374_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:53 2005
         (553 letters)



>mm_chr10_110195085_110196037
          Length = 953

 Score =  903 bits (467), Expect = 0.0
 Identities = 507/527 (96%), Gaps = 12/527 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaacagccaaggctacacagagaaaccatgttttgaaaaaccaaaagaccccaaccca 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 525 cagaacagccaaggctacacagagaaaccatgttttgaaaaaccaaaaaaccccaaccca 466

                                                                       
Query: 61  acccaaacc----------aaacacgtacaaaaaacccaaataaacaaaaccaaccaacc 110
           |||||||||          |||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 acccaaaccaaaccaaagaaaacacgtacaaaaaacccaaataaacaaaaccaaccaacc 406

                                                                       
Query: 111 aaaaacccaaactgcattcctgaacagcaagggaaaataagttcaaaagatactatttat 170
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 405 aaaaacccaaactgtattcctgaacagcaagggaaaataagttcaaaagatactatctat 346

                                                                       
Query: 171 aatcatgagaattatgatttattattatttataacatcaatgagaaggataagggtttta 230
           |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 345 aatcatgagaattatgatttattactatttataacatcaatgagaatgataagggtttta 286

                                                                       
Query: 231 ggagtaaatctaacaaattgtcaagatcttagagcagcagtttttaacctgtgctttgcc 290
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 ggagtaaatctaacaaattttcaagatcttagagcagcagtttttaacctgtgctttgcc 226

                                                                       
Query: 291 acccccttggcaaacttctgtctctaaaaatatctacattactgttcataacaggacagg 350
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acccccttggcaaactt--gtctctaaaaatatctacattactgttcataacaggacagg 168

                                                                       
Query: 351 aggaaaattacagttataaagtaccaacagaataattttatgtttgggggtcaccaaagc 410
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aggaaaattacagttataaaataccaacagaataattttatgtttgggggtcaccaaagc 108

                                                                       
Query: 411 agaagaaaatatattaaaaaataaattaggatggaaaaaaaaatcttaaagaaagaggaa 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 agaagaaaatatattaaaaaataaattaggatggaaaaaaaaatcttaaagaaagaggaa 48

                                                          
Query: 471 aggccctaacacaaaaccatgttaaacttgacagctttgtgagctga 517
           ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 47  aggccctaacacaaaaccatgttaaacttgagagctttgtgagctga 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)