Query= MSMg01no374_o24.b1 MSMg01no374_o24.b1 CHROMAT_FILE:
MSMg01no374_o24.b1 PHD_FILE: MSMg01no374_o24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:21 2005
(428 letters)
>mm_chr10_79271958_79272785
Length = 828
Score = 609 bits (315), Expect = e-178
Identities = 321/323 (99%)
Strand = Plus / Minus
Query: 6 gaattctcctttgatgcagctggggctgactctccaaactccagaacatcgatctctttc 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaattctcctttgaggcagctggggctgactctccaaactccagaacatcgatctctttc 264
Query: 66 tcgagcctggagggtgagagaacacacacagagccccacaaactcagtctgtgtttgttt 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcgagcctggagggtgagagaacacacacagagccccacaaactcagtctgtgtttgttt 204
Query: 126 ttgttcttttctctcccgaggacagggtttctctgtgtagccctggctgtcctggaactc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ttgttcttttctctcccgaggacagggtttctctgtgtagccctggctgtcctggaactc 144
Query: 186 actatgtagaccaggctggccttgacctgagagatttgcctgcctctgcctcccgagtgc 245
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 143 actatgtagaccaggctggccttgacctgagatatttgcctgcctctgcctcccgagtgc 84
Query: 246 tggggtgacaggtgggccccacgatgcccagctcaaacctaacttcatctttcttcttac 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 tggggtgacaggtgggccccacgatgcccagctcaaacctaacttcatctttcttcttac 24
Query: 306 atttacttattaccacatagtgt 328
|||||||||||||||||||||||
Sbjct: 23 atttacttattaccacatagtgt 1
Score = 139 bits (72), Expect = 3e-37
Identities = 96/104 (92%)
Strand = Plus / Plus
Query: 146 gacagggtttctctgtgtagccctggctgtcctggaactcactatgtagaccaggctggc 205
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 602 gacagggtttctctgtgtagccctggctgtcctggaactcactctggagaccaggctggc 661
Query: 206 cttgacctgagagatttgcctgcctctgcctcccgagtgctggg 249
|| || || ||| ||| ||||||||||||||||| |||||||||
Sbjct: 662 ctcgaactcagaaattcgcctgcctctgcctcccaagtgctggg 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_o24.g1 MSMg01no374_o24.g1 CHROMAT_FILE:
MSMg01no374_o24.g1 PHD_FILE: MSMg01no374_o24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:21 2005
(299 letters)
>mm_chr10_79118870_79119568
Length = 699
Score = 555 bits (287), Expect = e-162
Identities = 296/299 (98%)
Strand = Plus / Plus
Query: 1 catttggtgtttgctgcaggaccgaactgctccccacgaacatcgagctcacccccaaag 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 catttggtgtttgctgcaggaccgaactgctccccacgaacatcaagctcacccccaaag 260
Query: 61 aacgattcctgaacaggtccgcttcccacatcctaataacttttctcttccactacctct 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatgattcctgaacaggtccgcttcccacatcctaataacttttctcttccactacctct 320
Query: 121 gctgggtggtgggatagagaggttgaacccttattaaaagtagtttgcaaaaagtttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 gctgggtggtgggatagagaggttgaacccttattaaaagtagtttgcaaaaagtgtatg 380
Query: 181 cctacagtggggcatagaggggagggctcggagttggtgtccaggagtggctggaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctacagtggggcatagaggggagggctcggagttggtgtccaggagtggctggaaacca 440
Query: 241 gaatcgactcctcctctgcagggttcaggccggactggagttagtgtgggttgaggttg 299
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaatcgactcctcctctgcagggttcaggccggactggagttagtgtgggttgaggttg 499
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 699
Length adjustment: 9
Effective length of query: 290
Effective length of database: 690
Effective search space: 200100
Effective search space used: 200100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
