Query= MSMg01no375_k22.b1 MSMg01no375_k22.b1 CHROMAT_FILE:
MSMg01no375_k22.b1 PHD_FILE: MSMg01no375_k22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:21 2005
(389 letters)
>mm_chr10_31721527_31722315
Length = 789
Score = 344 bits (178), Expect = 5e-99
Identities = 202/212 (95%), Gaps = 4/212 (1%)
Strand = Plus / Plus
Query: 5 gaattctaatatctgcaaattttcatcatgaatcaagcagcgttaaagatatttattcac 64
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 205 gaattctaatatctgcaaattttcatcatgaatcaagcaacgttaaagatatttgttcac 264
Query: 65 attatttaagttcccaataggtagcaggggtgtttcatttactcctcatgacaaggtatc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attatttaagttcccaataggtagcaggggtgtttcatttactcctcatgacaaggtatc 324
Query: 125 aaggaactgtgtactcataatgttaaatataaaactttcctggaagcgggagtgggtggg 184
|||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 325 aaggaactgtgtactcatgatgttcaatataaaactttcctgcaagcgggagtgggtggg 384
Query: 185 ttgggaagcagggcggggggggggagggtata 216
|||||||||||||| ||||| ||||||||
Sbjct: 385 ttgggaagcagggcaggggg----agggtata 412
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_k22.g1 MSMg01no375_k22.g1 CHROMAT_FILE:
MSMg01no375_k22.g1 PHD_FILE: MSMg01no375_k22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:21 2005
(427 letters)
>mm_chr10_31909203_31910029
Length = 827
Score = 733 bits (379), Expect = 0.0
Identities = 413/427 (96%), Gaps = 4/427 (0%)
Strand = Plus / Minus
Query: 1 ttcatagtcaattccatgtttcccacttgcctacaaactattcccttagatgggttcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ttcatagtcaattccatgtttcccacttgcctacaaactattcccttagatgggttcttt 689
Query: 61 ctttctttctttgtttctttgtttctttgtttgtttgtttctttctttctttctttcttt 120
||||||||| ||||||| ||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 688 ctttctttc----tttctttctttctttctttctttctttctttctttctttctttcttt 633
Query: 121 ctttcaacaatatgataaaatgtttcagctttgtgacttttaacaataactctgagtaca 180
|||| ||||||||||||||| |||||||||||||||||||||||||||||||| || |||
Sbjct: 632 cttttaacaatatgataaaacgtttcagctttgtgacttttaacaataactcttagaaca 573
Query: 181 gaaagataatgcaacataaagctcaactagcctctgaaaaataattctactcagcagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gaaagataatgcaacataaagctcaactagcctctgaaaaataattctactcagcagggc 513
Query: 241 tttctcgtgccagggtggccaagattctcttggtaaaatgtagttatttatagacaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tttctcgtgccagggtggccaagattctcttggtaaaatgtagttatttatagacaggag 453
Query: 301 ccaaagtaatattatggacattcagtgaaagaaaataatttatcttttanaagagttcta 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 452 ccaaagtaatattatggacattcagtgaaagaaaataatttatcttttaaaagagttcta 393
Query: 361 aacaattattgatcaagtaaccttttagtacatgtttccctatcaggttttggntacatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 392 aacaattattgatcaagtaaccttttagtacatgtttccctatcaggttttgggtacatt 333
Query: 421 atcaggt 427
|||||||
Sbjct: 332 atcaggt 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 827
Length adjustment: 9
Effective length of query: 418
Effective length of database: 818
Effective search space: 341924
Effective search space used: 341924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
