Query= MSMg01no375_p21.b1 MSMg01no375_p21.b1 CHROMAT_FILE:
MSMg01no375_p21.b1 PHD_FILE: MSMg01no375_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:46 2005
(445 letters)
>mm_chr10_89219780_89220625
Length = 846
Score = 801 bits (414), Expect = 0.0
Identities = 438/446 (98%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 1 atggtgcacatcattaatcccagcactcaggaggcagagacagaaggacttctgtgagtt 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 atggtgcacaccattaatcccagcactcaggaggcagagacagaaggacttctgtgagtt 726
Query: 61 tgaggccagcttggtctgcacaatgagttccaggatacacaggtctatgtagagaaaccg 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 725 tgaggccagcttggtctgcacaatgagttccaggatacacaggtgtatgtagagaaaccc 666
Query: 121 tgtttcaaaacaaacaaaattctttaaggg-aaaaaaaatctgttataaacaactttttc 179
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 665 tgttgcaaaacaaacaaaattctttaagggaaaaaaaaatctgttataaacaactttttc 606
Query: 180 ttgaaaacttcaacatgaaccattaaaagatttagcaaaatcttaagtaagattagctcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ttgaaaacttcaacatgaaccattaaaagatttagcaaaatcttaagtaagattagctcc 546
Query: 240 aaaacagctctctgttaacagagctaaggataaaataaagaactgtaagaccagaaggaa 299
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaaacagctctctggtaacagagctaaggataaaataaagaactgtaagaccagaaggaa 486
Query: 300 aagagaacatttagttgcagaaaactgataaatctgggtagtgagagcacagatgctcca 359
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 485 aagagaacatttagttgcagaaaactgataaatctgggtagtgagagcagagatgctcca 426
Query: 360 acgtgtgccaggcagtctgccacgtcctaacttcggaacaagataacctcagcaatcagg 419
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 425 acgtgtgccaggcagtctgccacgtcctaacttcagaacaagataacctcagcaatcagg 366
Query: 420 ctggtgggatgcagcacttgctgctt 445
||||||||||||||||||||||||||
Sbjct: 365 ctggtgggatgcagcacttgctgctt 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 846
Length adjustment: 10
Effective length of query: 435
Effective length of database: 836
Effective search space: 363660
Effective search space used: 363660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_p21.g1 MSMg01no375_p21.g1 CHROMAT_FILE:
MSMg01no375_p21.g1 PHD_FILE: MSMg01no375_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:46 2005
(455 letters)
>mm_chr10_89051989_89052843
Length = 855
Score = 849 bits (439), Expect = 0.0
Identities = 451/455 (99%)
Strand = Plus / Plus
Query: 1 tatttgctctaattctacagaaaccatttgaacctcctgccatatatggtacctccacaa 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 tatttgctctaattctacagaaaccacttgaacctcctgccatatatggtacctccacaa 260
Query: 61 ttcatgatctttctgacagcggttgtggtcaaaatctttcggcttcttaaataatcagcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcatgatctttctgacagcggttgtggtcaaaatctttcggcttcttaaataatcagcc 320
Query: 121 agttgtcctccaatgggcaccacgattgtcatcaccatgtgtgggacagctgacaagaga 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttgtcctccgatgggcaccacgattgtcatcaccatgtgtgggacagctgacaagaga 380
Query: 181 cccacctggaaggaaaagaaacaaagagccgccttccattcttctgagatgtctttagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccacctggaaggaaaagaaacaaagagccgccttccattcttctgagatgtctttagac 440
Query: 241 atcttgcttacccctgttacacagccccacagtcattaccaagttcaatcatctaatgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcttgcttacccctgttacacagccccacagtcattaccaagttcaatcatctaatgtg 500
Query: 301 ggatcccaggaggtctgcattaaccatgaagcaatgaaagatagagcgatcctgtatatg 360
|||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct: 501 ggatcccaggaggtctgcattaaccatgaagcaatgaaaggtagagtgatcctgtatatg 560
Query: 361 gaccaactgtcttccccaccagactgaaagctccctggggtcagagacaactcttactca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaccaactgtcttccccaccagactgaaagctccctggggtcagagacaactcttactca 620
Query: 421 tcacagaggtaccagtatccagactatgctgtctc 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 tcacagaggtaccagtatccagactatgctgtctc 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
