Query= MSMg01no376_b07.b1 MSMg01no376_b07.b1 CHROMAT_FILE:
MSMg01no376_b07.b1 PHD_FILE: MSMg01no376_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:53 2005
(343 letters)
>mm_chr10_100898815_100899557
Length = 743
Score = 524 bits (271), Expect = e-153
Identities = 322/343 (93%), Gaps = 10/343 (2%)
Strand = Plus / Minus
Query: 9 tcatctatgatttctactgtcttactgttttagatttctcatctaaacttgtagactttg 68
||||| ||| ||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcatccatgttttctactgtctttctgttttagatttctcatctaaacttgtagactttg 362
Query: 69 ggatcccaattctgccttatatcttttgcctaaaacctacttactcattagagaatgttc 128
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct: 361 ggatcccaattctgccttatatcttttacctaaaacctacttactcattagagaaccttc 302
Query: 129 tttatggagttgctgaaagttaacaatgatattgaagtttgagcaacatggagaaataca 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tttatggagttgctgaaagttaacaatgatattgaagtttgagcaacatggagaaataca 242
Query: 189 gagaca-gagaaagatcaatctatagatatgtcaatagattagatagataggtagatagg 247
|||| | |||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 241 gaga-aggagaaagatcaatctatacatatgtcaatagattagatagatagatagataga 183
Query: 248 tagatagatagatagatagataga----tagataga----tagatagatagatagataga 299
|||||||||||||||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 182 tagatagatagatagatagatagatatttagatagatatttagatagatatttagataga 123
Query: 300 tagatagatagatagatagatagatagatagatagatagatag 342
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tagatagatagatagatagatagatagatagatagatagatag 80
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 124
Number of extensions: 43
Number of successful extensions: 43
Number of sequences better than 10.0: 1
Number of HSP's gapped: 40
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_b07.g1 MSMg01no376_b07.g1 CHROMAT_FILE:
MSMg01no376_b07.g1 PHD_FILE: MSMg01no376_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:53 2005
(442 letters)
>mm_chr10_100728963_100729797
Length = 835
Score = 781 bits (404), Expect = 0.0
Identities = 430/442 (97%), Gaps = 7/442 (1%)
Strand = Plus / Plus
Query: 1 caggtcttgtcattcttacttatcagcacacacattcataaaaaaatgcatgtttaaaga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 caggtcttgtcattcttacttatcagcacacacattcataaaaaa-tgcatgtttaaaga 259
Query: 61 ttttatgaaatgtttaattaccagcacacacattcataaagaatgcatgtttaaagattt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttatgaagtgtttaattaccagcacacacattcataaagaatgcatgtttaaagattt 319
Query: 121 tatgaagtgtgcacggtgtgcatcacatattatctgtcaaactagaacaaacttctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 tatgaagtgtgcacggtgtgcatcacatattatctgtcaaactagaacaaactgctttac 379
Query: 181 acatctgatttttgttgttgatttgttttgtgaaagtttggtcctttgcagttgccattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acatctgatttttgttgttgatttgttttgtgaaagtttggtcctttgcagttgccattt 439
Query: 241 catatctcctataatataaagtccctcaggtctactcttttgttccttggctctcatttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 440 catatctcctataatataaagtccctcaggtctactcttttgttccttggctctcgtttt 499
Query: 301 ttgttttagttcctttccattttttcctatcagtagtggaacagtcagcaggctctactt 360
||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 ttgtt------cctttccattttttcctatcagtagtggaacagttagcaggctctactt 553
Query: 361 ccctatagttcagcagcgatataataattacaaatggatatcctcatggtgtcacagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ccctatagttcagcagcgatataataattacaaatggatatcctcatggtgtcacagcac 613
Query: 421 tatgcaaagactgtgatatatt 442
||| ||||||||||||||||||
Sbjct: 614 tatacaaagactgtgatatatt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 835
Length adjustment: 9
Effective length of query: 433
Effective length of database: 826
Effective search space: 357658
Effective search space used: 357658
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
