Query= MSMg01no381_e06.b1 MSMg01no381_e06.b1 CHROMAT_FILE:
MSMg01no381_e06.b1 PHD_FILE: MSMg01no381_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:37 2005
(480 letters)
>mm_chr10_121247648_121248522
Length = 875
Score = 758 bits (392), Expect = 0.0
Identities = 460/492 (93%), Gaps = 21/492 (4%)
Strand = Plus / Minus
Query: 4 ggaattcctggttgcctgggtcctactggtcccagtaactcccggtgttggggcagatgt 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattcctgggtgcctgggtcctactggtcccagtaactcccggtgttggggcagatgt 697
Query: 64 tgtgtcctccttgcctctgatcctatgatcctaggtgtgttaggactcctgggagtagag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tgtgtcctccttgcctctgatcctatgatcctaggtgtgttaggactcctgggagtagag 637
Query: 124 cttccaatgggtgttgtgggactggctgcagagttcgtgcccagggtctgctcagggcac 183
||||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||
Sbjct: 636 cttccaatgggtgttgtgggactggctgcggagttcatgcccagggtctgcacagggcac 577
Query: 184 tgacccagaccagaagggctacattgcataatctaatttgtcatcttttttaaagtctct 243
|||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 576 tgacccagaccagaagggctgcattgcataatctaatttgtcatcttttttgaagtctct 517
Query: 244 tttatcccaacagctgctggcttctaaaccttgcatttgtaccctatgggctccctggtt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tttatcccaacagctgctggcttctaaaccttgcatttgtaccctatgggctccctggtt 457
Query: 304 attttcgctccctctcttttttttaagcttttaatgatttattatgtttgtttgttt--- 360
|||||| || ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 456 attttc--tc--tctcttttttt-aagcttttaatgatttattatgtttgtttgtttgtt 402
Query: 361 ----------ttttaa-ttcg-agttggtgtcttgtatgtccatgtgaggtgtgggagtc 408
|||||| |||| | ||||||||||||||||| |||||||||||||| ||
Sbjct: 401 tgtttgtttgttttaaattcgca-ttggtgtcttgtatgtctgtgtgaggtgtgggattc 343
Query: 409 cctggatctggagttccagacagttaggagctgcaatgtgggtgctggaaattgatcctg 468
|||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 342 cctggaactggagttccagacagttaggagctgcaatgtgggtgctggaaattgaacctg 283
Query: 469 ggtcctctggaa 480
||||||||||||
Sbjct: 282 ggtcctctggaa 271
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 875
Length adjustment: 10
Effective length of query: 470
Effective length of database: 865
Effective search space: 406550
Effective search space used: 406550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_e06.g1 MSMg01no381_e06.g1 CHROMAT_FILE:
MSMg01no381_e06.g1 PHD_FILE: MSMg01no381_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:22:37 2005
(471 letters)
>mm_chr10_121124973_121125843
Length = 871
Score = 884 bits (457), Expect = 0.0
Identities = 467/471 (99%)
Strand = Plus / Plus
Query: 1 cacatgtgggtcgtggcttgcacacccatgtgcacatatgtgcacatgcatattcacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatgtgggtcgtggcttgcacacccatgtgcacatatgtgcacatgcatattcacaca 260
Query: 61 cacagacacacacgtagtagataagatacacgtagataagcaagtgagtggggtacttga 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagacacacgcgtagtagataagatacacgtagataagcaagtgagtggggtacttga 320
Query: 121 cacgaggtaatatattctcgtcccatatgagcatgtgccccgttgactatcagtggttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacgaggtaatatattctcgtcccatatgagcatgtgccccgttgactatcagtggttcc 380
Query: 181 cagctgagaacgtcttttccagaatgatggagtctgtcctgaagaatctcttgtcagatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagctgagaacgtcttttccagaatgatggagtctgtcctgaagaatctcttgtcagatc 440
Query: 241 ccctcaacacattcatagaaagctggccaggggcacttatcagtggagtagcctactgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctcaacacattcatagaaagctggccaggggcacttatcagtggagtagcctactgcc 500
Query: 301 caacagagattaagtccatgaggttgtcttcttcagcagtgtacagagcccagccaggct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taacagagattaagtccatgaggttgtcttcttcagcagtgtacagagcccagccaggct 560
Query: 361 caggttcactcgaggagtgccctaatttttatttatccatatttgtacaagctggaagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caggttcactcgaggagtgccctaatttttatttatccatatttgtacaagctggaagtc 620
Query: 421 tcctatgtgttttatgtggncttagtctttgtcatctgggngaaagcctaa 471
||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 621 tcctatgtgttttatgtggccttagtctttgtcatctgggtgaaagcctaa 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
