Query= MSMg01no381_j06.b1 MSMg01no381_j06.b1 CHROMAT_FILE:
MSMg01no381_j06.b1 PHD_FILE: MSMg01no381_j06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:02 2005
(439 letters)
>mm_chr10_47554928_47555766
Length = 839
Score = 661 bits (342), Expect = 0.0
Identities = 351/354 (99%)
Strand = Plus / Minus
Query: 5 gaattcctaatactacgaagaagccagcatgatctctgccttctgtagcatagtattcaa 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 gaattcctaatactaggaagaagccagcatgatctctgccttctgtagcatagtattcaa 295
Query: 65 taaaatcagaaaaagggcattatctactaaggtctactaaggccttataaatctttgaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 taaaatcagaaaaagggcattatctactaaggtctactaaggccttataaatctttgaca 235
Query: 125 taatccaataagtttctaaaacaaatcctattctttttttaaagatttatttatttttta 184
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 taaaccaataagtttctaaaacaaatcctattctttttttaaagatttatttatttttta 175
Query: 185 tttatatgaatacactgcagctgtcttcagacacacactagaagagtatatcagatccca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tttatatgaatacactgcagctgtcttcagacacacactagaagagtatatcagatccca 115
Query: 245 ttatagatggttgtgacccaccatttggttgctgtgaatcgaactcaagtcctctggaag 304
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 114 ttatagatggttgtgacccaccgtttggttgctgtgaatcgaactcaagtcctctggaag 55
Query: 305 agaagtcagtgctcttagccatctctccagcccaagagaccctattctattgta 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 agaagtcagtgctcttagccatctctccagcccaagagaccctattctattgta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no381_j06.g1 MSMg01no381_j06.g1 CHROMAT_FILE:
MSMg01no381_j06.g1 PHD_FILE: MSMg01no381_j06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:02 2005
(457 letters)
>mm_chr10_47363947_47364803
Length = 857
Score = 642 bits (332), Expect = 0.0
Identities = 443/514 (86%), Gaps = 57/514 (11%)
Strand = Plus / Plus
Query: 1 cttcatcatcacaacatgttaaaatgtatctatcataaaatgttaacataaactatatga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 144 cttcatcatcacaacatgttaaaatgtgtctatcataaaatgttaacataaactatatga 203
Query: 61 aaactttgttttctattaagataaactaaaagtcatcttactattttgttcacgccatca 120
|| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 204 aagctttgttttctattaagatcaactaaaagtcatcttactattttgttcatgccatca 263
Query: 121 tattacaatggtttatgtaagagtagagtcctcaatacat------c-ctgtg------- 166
|||||||||||||||||| || ||||| ||||||||||| | |||||
Sbjct: 264 tattacaatggtttatgtgtgaatagagacctcaatacataccatgctctgtgaattcca 323
Query: 167 -------------------ctct-------gt------g-----------cccttccata 183
|||| || | ||||||||||
Sbjct: 324 tggattttgtcatttacctctcttttcttagtttttccgtaaaaaattaccccttccata 383
Query: 184 aaataaattgataatttaataattattatattatttgcattcattgtgcaaatttctcct 243
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 aaataaattaataatttaataattattatattatttacattcattgtgcaaatttctcct 443
Query: 244 tttgaattacatctctgtttatatataattggatcccaatgggatatcaaattaacaata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttgaattacatctctgtttatatataattggatcccaatgggatatcaaattaacaata 503
Query: 304 aatgattataacccccagcttggctgaacctctttaatgaacttaataaaacattaacta 363
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 504 aatgattataacccccagcttggctgaacctctttaatgaatttaataaaacattaacta 563
Query: 364 ttacacaaggaaatgaaacatcttatctatagaatctagttcttggaaagttgtgctgtt 423
||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 564 ttatacaaggaaatgaaacatcttatctacagaatctagttcctggaaagttgtgctgtt 623
Query: 424 catagatgcaatgtgggaatagggcttttcaagt 457
||||||||||||||||||||||||||||||||||
Sbjct: 624 catagatgcaatgtgggaatagggcttttcaagt 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
