Query= MSMg01no382_k23.b1 MSMg01no382_k23.b1 CHROMAT_FILE:
MSMg01no382_k23.b1 PHD_FILE: MSMg01no382_k23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:30 2005
(446 letters)
>mm_chr10_97035928_97036773
Length = 846
Score = 806 bits (417), Expect = 0.0
Identities = 430/435 (98%), Gaps = 2/435 (0%)
Strand = Plus / Plus
Query: 12 gaattctgcacaacgtctcttgaccatattcactctcataactccatgtcctcccagaag 71
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gaattctgcacaacgtatcttgaccatattcactctcataactccatgtcctcccagaag 273
Query: 72 atgaccaatacacagacacacacacagacacacacacagagagacgcacacacacacaca 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atgaccaatacacagacacacacacagacacacacacagagagacgcacacacacacaca 333
Query: 132 cacacccctacttcaaatcatttgcttttgactgttttatttataaatagattattttca 191
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cac--ccctacttcaaatcatttgcttttgactgttttatttataaatagattattttca 391
Query: 192 tatattttatattctgatcacaccccctcccccaatatgctctcagattattcccaccca 251
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tattttttatattctgatcacaccccctcccccaatatgctctcagattattcccaccca 451
Query: 252 tacatgctttctttatctctgtctttagaaaagtattagaaaaatttaaaagtgacatca 311
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tacatgctttctttatctccgtctttagaaaagtattagaaaaatttaaaagtgacatca 511
Query: 312 caagacaaaaggaagagtgtcaggcagtggtggtgcacgcctttaatcccagcacttggg 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 caagacaaaaggaagagtgtcaggcagtggtggtgcacgcctttaatcccagcacttggg 571
Query: 372 aggcagaggcaggaggatttccgagttcgaggccagcctggtctacagagtgagttccag 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 aggcagaggcaggaggatttccgagttcgaggccagcctggtctacagagtgagttccag 631
Query: 432 gacagccagggctac 446
|||||||||||||||
Sbjct: 632 gacagccagggctac 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_k23.g1 MSMg01no382_k23.g1 CHROMAT_FILE:
MSMg01no382_k23.g1 PHD_FILE: MSMg01no382_k23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:30 2005
(422 letters)
>mm_chr10_97128889_97129710
Length = 822
Score = 793 bits (410), Expect = 0.0
Identities = 419/422 (99%)
Strand = Plus / Minus
Query: 1 actaggggtgaggtagagagataagaaggcaaagacttagtaggtgggccaatgcacacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 actaggggtgaggtagagagataagaaggcaaagacttagtaggtgggccaatgcacacc 563
Query: 61 agggatgtaagatgagccttatgaaagcccactaattagtaaattcatttcagaatacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agggatgtaagatgagccttatgaaagcccactaattagtaaattcatttcagaatacca 503
Query: 121 gattttaaaaagaagtgtttgaatgcaggtgtcttatgttcatggatgctgcacttccag 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 gattttaaaaagaagtgtttgaatggaggtgtcttatgttcatggatgctgcacttccag 443
Query: 181 aagatatgggtcactaatttaaaaccacagtgcaaagcatagcctacctgcacaagtaag 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aagacatgggtcactaatttaaaaccacagtgcaaagcatagcctacctgcacaagtaag 383
Query: 241 accccagaggtctgcaaaacaacagaggccattcctatggcccttagtttcccaccaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 accccagaggtctgcaaaacaacagaggccattcctatggcccttagtttcccaccaaag 323
Query: 301 ctacacaggaaggtctgctttctgagaacaaaacacatcctcccctgccccactatctgc 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 322 ctacacaggaaggtctgctttctgagaacaaaacatatcctcccctgccccactatctgc 263
Query: 361 caagacagtttggaaaatgttctccctcctggctacttttcattgcacagaaagttgcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caagacagtttggaaaatgttctccctcctggctacttttcattgcacagaaagttgcta 203
Query: 421 ca 422
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
