Query= MSMg01no382_l09.b1 MSMg01no382_l09.b1 CHROMAT_FILE:
MSMg01no382_l09.b1 PHD_FILE: MSMg01no382_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:32 2005
(400 letters)
>mm_chr10_19110050_19110849
Length = 800
Score = 725 bits (375), Expect = 0.0
Identities = 388/393 (98%), Gaps = 1/393 (0%)
Strand = Plus / Plus
Query: 5 gaattctctgtttagttctataccccatcttttgattggattgtttggg-tttttttggt 63
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 204 gaattctctgtttagttctataccccatcttttgattggattgtttgggttttttttggt 263
Query: 64 ggttagcttcttgagttttttaaatatgttttggatattaaccctctatcagatgtgcaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggttagcttcttgagttttttaaatatgttttggatattaaccctctatcagatgtgcaa 323
Query: 124 ttagtgaagatttttttcccaatctgtaggttgctagtttgtcctattgaccatgtcctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttagtgaagatttttttcccaatctgtaggttgctagtttgtcctattgaccatgtcctt 383
Query: 184 agcttcacagaagctctccagtttcatgaggcccctttattcctctctttaacgtgacag 243
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 384 agcttcacagaagctctccagtttcatgaggcccctttattcctccctttaacgtgacag 443
Query: 244 ttccatgctcctaagtgcatatttttgtgtaatcatcacctgctatctttagaacctatt 303
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 444 ttccatgctcctaagtgcatatttttgtgtaatcatcaccagctatctttagaacctatt 503
Query: 304 caaaatttccacggtgaaacttcaacacatgttctttgaaatgagccttggtggtgatgt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caaaatttccacggtgaaacttcaacacatgttctttgaaatgagccttggtggtgatgt 563
Query: 364 agggatggtgtgaattggnggncttgagataga 396
|||||||||||||||||| || |||||||||||
Sbjct: 564 agggatggtgtgaattgggggccttgagataga 596
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_l09.g1 MSMg01no382_l09.g1 CHROMAT_FILE:
MSMg01no382_l09.g1 PHD_FILE: MSMg01no382_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:32 2005
(502 letters)
>mm_chr10_19156124_19157025
Length = 902
Score = 872 bits (451), Expect = 0.0
Identities = 463/467 (99%)
Strand = Plus / Minus
Query: 2 atcttttgctttacaatcaccattacacaaaattagaacagagctgtattacagaggaga 61
||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct: 537 atcttttgctttataatcaccgttacacaaagttagaacagagctgtattacagaggaga 478
Query: 62 tacagatattaatggtggccaagtcttacaaatccccatgttactcagcctatctaggtc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tacagatattaatggtggccaagtcttacaaatccccatgttactcagcctatctaggtc 418
Query: 122 ttagtttaaagatttattttcaggataaaaaagagagagatgtgagagaatttctgttgc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttagtttaaagatttattttcaggataaaaaagagagagatgtgagagaatttctgttgc 358
Query: 182 caggagcctctgggcctctgtgtcatctgtttatcttgtttcaagccagtattttaggta 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 caggagcctctgggcctctgtgtcatctgtttatcttgtttcaagccagtattttaggta 298
Query: 242 ttcccttcttatacttgccaattcattcacatccatttctggttcctagttagaacacct 301
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 297 ttcccttcttatacttgccaattcattcacatccatttctggttccaagttagaacacct 238
Query: 302 ttgtccagcaccctaccccttaccaattaaactgtcttttaatttgaagatatttttata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ttgtccagcaccctaccccttaccaattaaactgtcttttaatttgaagatatttttata 178
Query: 362 tacaatatatttgaatatatgcttttctctcccccaactctcctcctatgtccttccatc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 tacaatatatttgaatatatgcttttctctcccccaactctcctcctatgtccttccatc 118
Query: 422 tccctactcacccaacttcaaattcctctctctctctctctctctct 468
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 tccctactcacccaacttcaaattcctctctctctctctctctctct 71
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 48
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 902
Length adjustment: 10
Effective length of query: 492
Effective length of database: 892
Effective search space: 438864
Effective search space used: 438864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
