Query= MSMg01no382_p05.b1 MSMg01no382_p05.b1 CHROMAT_FILE:
MSMg01no382_p05.b1 PHD_FILE: MSMg01no382_p05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:51 2005
(539 letters)
>mm_chr10_7808145_7809084
Length = 940
Score = 538 bits (278), Expect = e-157
Identities = 302/310 (97%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgcttttc-gttgaaagttagtatcagttgcctactgttgctctaacaaatc 63
|||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 310 gaattctctgctaagcagttgaaagttagtatcagttgcctactgctgctctaacaaatc 251
Query: 64 acacaaagcgatacaaagtatccaagtgcataggttggagagcttcaaatcaaggcgctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 acacaaagcgatacaaagtatccaagtgcataggttggagagcttcaaatcaaggcgctg 191
Query: 124 ctgggctgtggtttttgtagactttctaggaaaaagccttttaaaacttccagagactgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ctgggctgtggtttttgtagactttctaggaaaaagccttttaaaacttccagagactgc 131
Query: 184 tgaccttttgtgctgtgtggcttcttcctctgtttcagagaccagcaacataccatctcc 243
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 130 tgacctttcgtgctgtgtggcttcttcctctgtctcagagaccagcaacataccatctcc 71
Query: 244 aagtcagtctctgtgcccctaacctgtagagagattatcttatgtattgcacagatgcct 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 70 aagtcagtctctgtgcccctaacctgtagagagatcatcttatgtattgcacagatgcct 11
Query: 304 catctgttaa 313
||||||||||
Sbjct: 10 catctgttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 940
Length adjustment: 10
Effective length of query: 529
Effective length of database: 930
Effective search space: 491970
Effective search space used: 491970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_p05.g1 MSMg01no382_p05.g1 CHROMAT_FILE:
MSMg01no382_p05.g1 PHD_FILE: MSMg01no382_p05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:51 2005
(553 letters)
>mm_chr10_7763479_7764431
Length = 953
Score = 1058 bits (547), Expect = 0.0
Identities = 550/551 (99%)
Strand = Plus / Plus
Query: 1 acctttcccttaccttcttgttatctttggactttgaacagattgatttatggtacttca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctttcccttaccttcttgttatctttggactttgaacagattgatttatggtacttca 260
Query: 61 ctgtgggaagagatcttcttagtgttgatgcacaccttcatctttcctggaattgctctc 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgggaagagatcttcttactgttgatgcacaccttcatctttcctggaattgctctc 320
Query: 121 ccagacacacacagaagtaatattttaccaggtagctgggcctccctcagccctgtgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagacacacacagaagtaatattttaccaggtagctgggcctccctcagccctgtgagg 380
Query: 181 ttggcaatgtaattaatcatcacacatacagtcatggggtcaagaagaaatgagtaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggcaatgtaattaatcatcacacatacagtcatggggtcaagaagaaatgagtaactt 440
Query: 241 tcctctagttggtaaagagaatggaaataaaaaaaatgggatactagcctttctaaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcctctagttggtaaagagaatggaaataaaaaaaatgggatactagcctttctaaatgt 500
Query: 301 cagaccaggactttgttagaaacttctaacctgtcttcattctagaactgatatctagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaccaggactttgttagaaacttctaacctgtcttcattctagaactgatatctagta 560
Query: 361 caaccatattttgcttaggaagtataaacaaataaccttagcttagggtaaatgaagaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaccatattttgcttaggaagtataaacaaataaccttagcttagggtaaatgaagaga 620
Query: 421 ttctgtccaataaaattaaaagtttcagctataggatatattaataattctgttatggga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctgtccaataaaattaaaagtttcagctataggatatattaataattctgttatggga 680
Query: 481 gagtcaaggccaaaaaagtctggcttttgagatttccctctgggttgactggaaggggca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagtcaaggccaaaaaagtctggcttttgagatttccctctgggttgactggaaggggca 740
Query: 541 gtcatgaagtc 551
|||||||||||
Sbjct: 741 gtcatgaagtc 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
