Query= MSMg01no383_c09.b1 MSMg01no383_c09.b1 CHROMAT_FILE:
MSMg01no383_c09.b1 PHD_FILE: MSMg01no383_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:07 2005
(466 letters)
>mm_chr10_84223937_84224805
Length = 869
Score = 857 bits (443), Expect = 0.0
Identities = 454/459 (98%), Gaps = 4/459 (0%)
Strand = Plus / Plus
Query: 5 gaattctccctccctcccccaataccc---tgcctctgaaaaaggatttacaaagggtta 61
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctccctcccccaatacccccctgcctctgaaaaaggatttacaaagggtta 264
Query: 62 ctagattttaggggagcagtattcaatgtcaacagaggcttctagatgttgaaggcagcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctagattttaggggagcagtattcaatgtcaacagaggcttctagatgttgaaggcagcc 324
Query: 122 ccataggccccagcatatgctggcgagtgacacacaagtcagtgttctgaaatgcaccat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ccataggccccagcatatgctggcgagtgacacacaagtcagtgttctgaaatgcaccat 384
Query: 182 caaaggacaaccaccttataattcttgcatctcacaatcccatgacatgctgggcaaaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaaggacaaccaccttataattcttgcatctcacaatcccatgacatgctgggcaaaag 444
Query: 242 agcccttcccatttgtttgagactgttgattcattcataagtatggagtagatatttttt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agcccttcccatttgtttgagactgttgattcattcataagtatggagtagatatttttt 504
Query: 302 aaaatgtctgtatttgagtctggcacacatgtgtaattccagcactccagaggcatagtc 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taaatgtctgtatttgagtctggcacacatgtgtaattccagcactccagaggcatagtc 564
Query: 362 aagaggatagtcttgagtttgaggccagcctgggctaaatagcaaatattcaaccaccca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aagaggatagtcttgagtttgaggccagcctgggctaaatagcaaatattcaaccaccca 624
Query: 422 gggatgctgtcaagacactgtctcanaaaaaaaaaaaaa 460
||||||||||||||||||||||||| |||||||||||||
Sbjct: 625 gggatgctgtcaagacactgtctca-aaaaaaaaaaaaa 662
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 869
Length adjustment: 10
Effective length of query: 456
Effective length of database: 859
Effective search space: 391704
Effective search space used: 391704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_c09.g1 MSMg01no383_c09.g1 CHROMAT_FILE:
MSMg01no383_c09.g1 PHD_FILE: MSMg01no383_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:07 2005
(498 letters)
>mm_chr10_84386934_84387831
Length = 898
Score = 949 bits (491), Expect = 0.0
Identities = 494/495 (99%)
Strand = Plus / Minus
Query: 4 aagaaatcatcagagaactgcagggagacaacctacaacctgcaaaaaggctcctgaact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 aagaaatcatcagagaactgcagggagacaacctacaacctgcaaaaaggctcctgaact 839
Query: 64 tactagttgtgacttcaagctagtaaactgtgcctggattcctcttatgaaaatgaagta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 tactagttgtgacttcaagctagtaaactgtgcctggattcctcttatgaaaatgaagta 779
Query: 124 atccttagctcagagggtgattgtgagggttctgacatttatggcacctaaaatatctca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 atccttagctcagagggtgattgtgagggttctgacatttatggcacctaaaatatctca 719
Query: 184 ctacctggcaagtagtaaacagtatgcattaggaagctgttgctgctgctactagtgctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 ctacctggcaagtagtaaacagtatgcattaggaagctgttgctgctgctactagtgctg 659
Query: 244 ctaatgagattaagggcaaattaactggcagggagaaaggtatcgtggctcccctggaat 303
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctaatgagattaaggacaaattaactggcagggagaaaggtatcgtggctcccctggaat 599
Query: 304 gattggccagagtgtatactttccactgtgtagcagagcagaggcaaatgggtagaataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gattggccagagtgtatactttccactgtgtagcagagcagaggcaaatgggtagaataa 539
Query: 364 ctggcttgtttgcatagggagtggtggtcacaaaccaggagcacagaattacaactctca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 ctggcttgtttgcatagggagtggtggtcacaaaccaggagcacagaattacaactctca 479
Query: 424 cagagagcatgtgctctctgaatcaatcccacctgaactcttcctgaggcaaaccaacga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 cagagagcatgtgctctctgaatcaatcccacctgaactcttcctgaggcaaaccaacga 419
Query: 484 gccactcctcggcac 498
|||||||||||||||
Sbjct: 418 gccactcctcggcac 404
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
