Query= MSMg01no383_h16.b1 MSMg01no383_h16.b1 CHROMAT_FILE:
MSMg01no383_h16.b1 PHD_FILE: MSMg01no383_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:32 2005
(516 letters)
>mm_chr10_115337311_115338224
Length = 914
Score = 835 bits (432), Expect = 0.0
Identities = 490/510 (96%), Gaps = 2/510 (0%)
Strand = Plus / Plus
Query: 4 ggaattcatttattatgaaaatttttggagttattcataatagatgcaatagccctggtg 63
||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 204 ggaattcatttattaggaaaattcttggagttattcataatggatgcaatagccctggtg 263
Query: 64 ataataaggttaggagataggcactgagggatccctgtgttcgtgttcatggtacaaagg 123
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 ataataaggttaggagacaggcattgagggatccctgtgttcgtgttcatggtacaaagg 323
Query: 124 cagtggttcagagaaaacatgcatgaacacaggaggggctgggacactgtatgccagtct 183
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 324 cagtggttcagagaaaacatgcatgaacacaggaggggctgggccactgtatgccagtct 383
Query: 184 gttaactctgacacttcatgcagcaagtgaagacagcaaggagacaagaggtagattgtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 384 gttaactctgacacttcatgcagcaagtgaagacagcaaggagacaagaggtagattatt 443
Query: 244 ggtgttgtgtatttagtgctatcctttgcccccaacacaatataatggtacaattttgtg 303
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggcattgtgtatttagtgttatcctttgcccccaacacaatataatggtacaattttgtg 503
Query: 304 ataaactatttccctaagacacagtgcttagtaccataaatgttaaaatcttgaaaaaaa 363
|||| |||||||| |||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 504 ataagctatttccataagacacggtgcttaataccataaatgttaaaatcttgaaaaaaa 563
Query: 364 aaacagtcccattcctagaaaagagatgaaggtaacttaagtttcatatgaggcagaaaa 423
| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 564 a--cagttccattcctagaaaagagatgaaggtaactttagtttcatatgaggcagaaaa 621
Query: 424 acaaatgaacaagcaaacagaaacatccccaagagaaagatgtcggtagcagaattcttc 483
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 622 acaaatgaacaagcaaacagaaacatccctaagagaaagatgtctgtagcagaattcttc 681
Query: 484 ggaagggtgttttgactatatgcaaaaaaa 513
||||||||||||||||||||||||||||||
Sbjct: 682 ggaagggtgttttgactatatgcaaaaaaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 914
Length adjustment: 10
Effective length of query: 506
Effective length of database: 904
Effective search space: 457424
Effective search space used: 457424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_h16.g1 MSMg01no383_h16.g1 CHROMAT_FILE:
MSMg01no383_h16.g1 PHD_FILE: MSMg01no383_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:32 2005
(492 letters)
>mm_chr10_115510823_115511714
Length = 892
Score = 862 bits (446), Expect = 0.0
Identities = 483/500 (96%), Gaps = 8/500 (1%)
Strand = Plus / Minus
Query: 1 aacagaacatcattacttgttacagacgaagtcaagagctcagagaccttgtcaggagag 60
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 aacagaacatcattacttggtacagacgaagtcaagagctcagagaccttgtcaggagag 610
Query: 61 gctaggccgagtcacaggaggtcgattttaattaacggatgtctagttataggtactcag 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gctaggctgagtcacaggaggtcgattttaattaacggatgtctagttataggtactcag 550
Query: 121 gtgagtgatagcgtgagcgacactttgacttgatgctctatgaccagcaccacctacatg 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgagtgatagcgtgagtgacactttgacttgatgctctatgaccagcaccacctacatg 490
Query: 181 caagtcctcatctgtgtcactcaccattacacaggaaaaacttataacgacgttcgcatg 240
|||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||
Sbjct: 489 caagtcctcatctgtgtcactcaccattacacaggaaaaacttataacgatgtccccatg 430
Query: 241 tattggccagatgctgtaagactagctctatggaatgtttccgagtaattcataagtaaa 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 429 tattggccagatgctgtaagactagctctatggaatgtttccgagaaattcataagtaaa 370
Query: 301 tgtaagaatttttggatggcgaatataacgtagaccacaaagttaaatcacgtggaacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtaagaatttttggatggcgaatataacgtagaccacaaagttaaatcacgtggaacaa 310
Query: 361 agcagctagtcattactgcttcagggtagaggatgctgagtccctgtggtgtgccctgtg 420
||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 309 agcagctagtcattactgcttcagggtagaggatgctgagttcctatggtgtgccctgtg 250
Query: 421 tgagcatgacaagcatcttccctgtcagtttgtgtaagccagggcacac--------ata 472
||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 249 tgagcatgacaagcatcttccctgtcagtttgtgtaagccagggcacacctaattacata 190
Query: 473 actctcgactcctttgcttt 492
||||||||||||||||||||
Sbjct: 189 actctcgactcctttgcttt 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
