Query= MSMg01no383_k24.b1 MSMg01no383_k24.b1 CHROMAT_FILE:
MSMg01no383_k24.b1 PHD_FILE: MSMg01no383_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:47 2005
(364 letters)
>mm_chr10_124391099_124391860
Length = 762
Score = 640 bits (331), Expect = 0.0
Identities = 356/365 (97%), Gaps = 4/365 (1%)
Strand = Plus / Plus
Query: 1 attgattgatctgaggcagtgtcttagatgggagatggagggtaggttgaaatggtgctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgattgatctgaggcagtgtcttagatgggagatggagggtaggttgaaatggtgctc 260
Query: 61 aagctgctgtttttcgagaagatggtccagtggttcataaacagaatctctaaggcttaa 120
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct: 261 aagctgctgtttttcgagaagatggtctagtggttcaaaaacagaatctctaaggcttaa 320
Query: 121 agtttggagataatgtggctcatttgaatgtaaaaacaaaacttaattaaggtctaagcc 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 agtttggagataatgtggctcatttgaatgtaaaaataaaacttaattaaggtctaagcc 380
Query: 181 cagagagagaggcagggctcagttctaggcata-gggaagtatgtaataaaccagattat 239
||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||
Sbjct: 381 cagagggagaggcagggctcagttctaggcataaggga-gtatgtaataaaccagattat 439
Query: 240 tttagggagtttattcatattcataagaacaacatagaataatatttgagaattttaata 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttagggagtttattcatattcataagaacaacatagaataatatttgagaattttaata 499
Query: 300 caacagtgttcataatagtaactgttgtgataagaaaaattttatcttgtatattgtgct 359
||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 500 caa--gtgttcataatagtaactgttgtgataagaaaaattttatctcgtatattgtgct 557
Query: 360 ttgca 364
|||||
Sbjct: 558 ttgca 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 762
Length adjustment: 9
Effective length of query: 355
Effective length of database: 753
Effective search space: 267315
Effective search space used: 267315
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_k24.g1 MSMg01no383_k24.g1 CHROMAT_FILE:
MSMg01no383_k24.g1 PHD_FILE: MSMg01no383_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:47 2005
(388 letters)
>mm_chr10_124558534_124559320
Length = 787
Score = 727 bits (376), Expect = 0.0
Identities = 385/388 (99%), Gaps = 1/388 (0%)
Strand = Plus / Minus
Query: 1 aaatacaacaaagttctgttgttgagctgcccaatccattacttagcaggcaggctgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 aaatacaacaaagttctgttgttgagctgcccaatccattacttagcaggcaggctgcaa 493
Query: 61 aaactccacaaaggtatccatgggctcttaacaaaaaagtgattgcaaagtcatcctgtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 aaactccacaaaggtatccatgggctcttaacaaaaaagtgattgcaaagtcatcctgtc 433
Query: 121 cagccgctgtcacttctgacatcttatgcgccaacctttctatgtgcacacttggcttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cagccgctgtcacttctgacatcttatgcgccaacctttctatgtgcacacttggcttat 373
Query: 181 ggttattttaactctatgtacgctacagatggcattggaagtcaactggcatgaacgcag 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ggttattttaactctatgtacactacagatggcattggaagtcaactggcatgaacgcag 313
Query: 241 cagggcaacaaaatcaatagcatctgcacaattacagaaggaatgcacacattttcatag 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 312 cagggcaacaaaatcaatagcatctgcacaattacagaaggaatgcacgcattttcatag 253
Query: 301 gtattttctagataaatcctatccttgtttctaggcccctaatgaatttgccaacacaca 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 252 gtattttctagataaatcctatccttgtttctagg-ccctaatgaatttgccaacacaca 194
Query: 361 cacacacacacacacacacacacacaca 388
||||||||||||||||||||||||||||
Sbjct: 193 cacacacacacacacacacacacacaca 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 787
Length adjustment: 9
Effective length of query: 379
Effective length of database: 778
Effective search space: 294862
Effective search space used: 294862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
