Query= MSMg01no384_e02.b1 MSMg01no384_e02.b1 CHROMAT_FILE:
MSMg01no384_e02.b1 PHD_FILE: MSMg01no384_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:31 2005
(577 letters)
>mm_chr10_103178347_103179323
Length = 977
Score = 1000 bits (517), Expect = 0.0
Identities = 564/583 (96%), Gaps = 6/583 (1%)
Strand = Plus / Plus
Query: 1 ccccaccccactttttcctctgaagactccaattcagaaacccctacttttattgcactt 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 ccccaccccactttttcctctgaaggctccaattcagaaacccctacttttattgcactt 260
Query: 61 agttacagttggcagaattcattttctaatgggcttagagtcaaagctcttcttaatact 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 agttacagttggcagaattcattttctaatgggctttgagtcaaagctcttcttaatact 320
Query: 121 tcactggccattgtagagaactccctcaatttattgtagcagtagacattccatgtagaa 180
|||||||| ||| | ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 321 tcactggctattctggagaactccctcaatttcttgtatcagtagacattccatgtagaa 380
Query: 181 tctggcttaatcaaaagcatcccaaattgctcctgggccagaaaacagagacactcatta 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttggcttaatcaaaagcatcccaaattgctcctgggccagaaaacagagacactcatta 440
Query: 241 cctaatcatggaagtgacttcttctctgcatctttctcttggtgacaagtcacactggga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaatcatggaagtgacttcttctctgcatctttctcttggtgacaagtcacactggga 500
Query: 301 ggatatcaactaaggttattattgaaaagattttggtatcattatgaagaactacaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggatatcaactaaggttattattgaaaagattttggtatcattatgaagaactacaggca 560
Query: 361 actaaggaatgtggaaagcagaagaaatcatctcccccagagaatgttcattaacttatt 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 actaaggaatgtggaaagcagaagaaatcatctcctccagagaatgttcattaacttatt 620
Query: 421 atgcaatatcaaaagtaaactatgaaaatatacatacaattaacatacaaactgagcatc 480
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcaatatcaaaggtaaactatgaaaatatacatacaattaacatacaaactgagcatc 680
Query: 481 atgtacttatatgtgtgtgcatgtatgtgtgtgtgtgt------ttgtgtgtgaaggggt 534
|||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 681 atgtacttatgtgtgtgtgcatgtatgtgtgtgtgtgtgtgtgtttgtgtgtgaaggtgt 740
Query: 535 atgtttctgagacacactgaaaaaacaaagttcatctgtttgc 577
|||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 atgtttctgagacacattgaaaaaacaaagttcatctgtttgc 783
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 577
Length of database: 977
Length adjustment: 10
Effective length of query: 567
Effective length of database: 967
Effective search space: 548289
Effective search space used: 548289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_e02.g1 MSMg01no384_e02.g1 CHROMAT_FILE:
MSMg01no384_e02.g1 PHD_FILE: MSMg01no384_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:31 2005
(397 letters)
>mm_chr10_103337872_103338668
Length = 797
Score = 721 bits (373), Expect = 0.0
Identities = 388/393 (98%), Gaps = 1/393 (0%)
Strand = Plus / Minus
Query: 1 atttcccatgctgctatggccatttacacagaaaacaggaaactccacattctaccttca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 420 atttcccatgctgctatggccatttacacagaaaacaggatactccacattctaccttca 361
Query: 61 gtttcttgtctgaagacagaggccaaatctaaagctcatgcacatttgtagaatttctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gtttcttgtctgaagacagaggccaaatctaaagctcatgcacatttgtagaatttctaa 301
Query: 121 gataataaccgagcattcaatgtagaattcagtaaaaatgtggatagagggataagaatt 180
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 300 gataataaccgaacattcaatgtagaattcagtaaaaatgtggatagaggaataagaatt 241
Query: 181 taatttagttggtagtatggtttcctgacaagaacaaagtagacacaagaagacaaatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 taatttagttggtagtatggtttcctgacaagaacaaagtagacacaagaagacaaatgt 181
Query: 241 gtcctgctgtctctcactgtaggatgttactcttaagtctttaggcaattctgttcaatt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 180 gtcctgctgtctctcactgtaggatattactcttaagtctttaggcaattctgttcaatt 121
Query: 301 tgcaatgcatatagagg-aaatgcactgttgtagtagatcagttaaatggaaaggatgca 359
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 tgcaatgcatatagaggaaaatgcactgttgtagtagatcagttaaatggaaaggatgca 61
Query: 360 actggaggcattaaatagtgttgtagatggggg 392
|||||||||||||||||||||||||||||||||
Sbjct: 60 actggaggcattaaatagtgttgtagatggggg 28
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
