Query= MSMg01no384_e12.b1 MSMg01no384_e12.b1 CHROMAT_FILE:
MSMg01no384_e12.b1 PHD_FILE: MSMg01no384_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:33 2005
(522 letters)
>mm_chr10_41762238_41763159
Length = 922
Score = 913 bits (472), Expect = 0.0
Identities = 505/524 (96%), Gaps = 17/524 (3%)
Strand = Plus / Minus
Query: 5 gaattcacagaatga--tcccagtcaatctgctgtgacttctaggctctaagagggttga 62
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcacagaa--acctcccagtcaatctgctgtgacttctaggctctaagagggttga 458
Query: 63 cttatagcagatcaataggcagacattacgatttgtctggggggtcactcagagcccaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 cttatagcagatcaataggcagacattacgatttgtctggggggtcactcagagcccaag 398
Query: 123 gaccagaacaatgccagacactggaagaggctatgcaacattgtaatgtcaatttttaac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 gaccagaacaatgccagacactggaagaggctatgcaacattgtaatgtcaatttttaac 338
Query: 183 tttcagaagaagctagaatgaactggaatggatttcatgaggatagcaaaaggagagttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 tttcagaagaagctagaatgaactggaatggatttcatgaggatagcaaaaggagagttg 278
Query: 243 gcagaatcagcctccaatatgcaccactggacacatgccaggggccttctacttaggtgc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gcagaatcagcctccaatatgcaccactggacacatgccaggggccttctacttaggtgc 218
Query: 303 tgccctatcccaa--ctatccctta--ggtgcaaaggaccaacccccaactaggctcaag 358
||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 217 tgccctatcccaagg---------aggggtgcaaaggaccaacccccaactaggctcaag 167
Query: 359 tttgattttatcttttgtttaacctcaggaagaagcatgaaggtcctgtcagaatgtgac 418
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 166 tttgattttatcttttgtttaacctcagggagaagcatgaaggttctgtcagaatgtgac 107
Query: 419 atctcccctgatcctaaagacagctctagaaggctagaccacccactcagcactctggag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 atctcccctgatcctaaagacagctctagaaggctagaccacccactcagcactctggag 47
Query: 479 atgcccacatcaacgtcctcaggaaagccacatgctatactttg 522
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atgcccacatcaacgtcctcaggaaagccacatgctatactttg 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no384_e12.g1 MSMg01no384_e12.g1 CHROMAT_FILE:
MSMg01no384_e12.g1 PHD_FILE: MSMg01no384_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:26:33 2005
(532 letters)
>mm_chr10_41622083_41623014
Length = 932
Score = 1006 bits (520), Expect = 0.0
Identities = 529/532 (99%)
Strand = Plus / Plus
Query: 1 ctaaacttcattctatgcctgccatatgtaaaatagagtgttctctcttcaggtaagtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaaacttcattctatgcctgccatatgtaaaatagagtgttctctcttcaggtaagtga 260
Query: 61 ttccttctttgaggtggaagctctcatggaaaagatgaggcagttacaggaatgccgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccttctttgaggtggaagctctcatggaaaagatgaggcagttacaggaatgccgaga 320
Query: 121 ggaggaggaggctagccaggaggagatggcgtcgcggtttgagatggaaaagagagagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaggaggaggctagccaggaggagatggcgtcgcggtttgagatggaaaagagagagag 380
Query: 181 catgtttgtcttctcttcgggtaagaacagccagaatatgctcaatatagtttctcttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgtttgtcttctcttcgggtaagaacagccagaatatgctcaatatagtttctcttac 440
Query: 241 aagcccaacttttttatttagagaatgtcaatacatttttaaaagcaggcctaaaggtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagcccaacttttttatttagagaatgtcaatacatttttaaaagcaggcctaaaggtgt 500
Query: 301 gttctttcaggaaggctacttgtaagggctttcctccttacaaatacttaagaaaggcaa 360
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 gtcctttcaggaaggctacttgtaagggctttcctccttacaaatagttaagaaaggcaa 560
Query: 361 ctaagaatagcatgccatgtaatacaccaacactctccccagctttcttgtttgctaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaagaatagcatgccatgtaatacaccaacactctccccagctttcttgtttgctaaat 620
Query: 421 gttattactagaagtgattggcaggatgtgtgagccacaccatgcatgcatgtggaggtc 480
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttattactggaagtgattggcaggatgtgtgagccacaccatgcatgcatgtggaggtc 680
Query: 481 agaggacaactgtcaggaccagttctttcctccccaagtgggtccctcagag 532
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaggacaactgtcaggaccagttctttcctccccaagtgggtccctcagag 732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
