Query= MSMg01no385_d15.b1 MSMg01no385_d15.b1 CHROMAT_FILE:
MSMg01no385_d15.b1 PHD_FILE: MSMg01no385_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:44 2005
(396 letters)
>mm_chr10_94072956_94073751
Length = 796
Score = 687 bits (355), Expect = 0.0
Identities = 387/405 (95%), Gaps = 14/405 (3%)
Strand = Plus / Plus
Query: 5 gaattctctgagtctccagtgtcctgcctgaaactacatggtatctcctctcagagctga 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgagtttccagtgtcctgcctgaaactacatggtatctcctctcagagctga 264
Query: 65 gactctgaggatttcatggtcctttctaacacatagggg---------gatgtgtgtgtg 115
||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 265 gactctgaggatttcatggtcctttctaacacataggggtgtgtgtgtg-tgtgtgtgtg 323
Query: 116 tgtgtctttgtgtgtatgtctgtatgtatatatctgtgtgtctgtgagtgtgtgtctgtg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtgtctttgtgtgtatgtctgtatgtatatatctgtgtgtctgtgagtgtgtgtctgtg 383
Query: 176 tgtaagtatgtatctgtgtgtgtaagcttgtatatctgtgtgtgtttgcatgtgtgtctg 235
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 tgtaagtatgtatctgtgtgtgtaagcttgtatatctgtgtgtgtttgcacgtgtgtctg 443
Query: 236 tgggtttgtgagcgt----atgtatgtatctgtgtatgtctatgtgcatatatacaaatg 291
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 444 tgggtttgtgagcgtgagtatgtatgtatctgtgtatgtctatgtgcatatatgtaaatg 503
Query: 292 tgtgtggttgtatgtgcatgtgagtgagtatgggttagtgagcatgcatgtgtgattgtg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtgtggttgtatgtgcatgtgagtgagtatgggttagtgagcatgcatgtgtgattgtg 563
Query: 352 tgtgtgtgtctatgtgtgtcagtgtgtatgtatgtctgtgcaggt 396
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgtgtgtctatgtgtgtcagtgtgtatgtatgtctgtgcaggt 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 796
Length adjustment: 9
Effective length of query: 387
Effective length of database: 787
Effective search space: 304569
Effective search space used: 304569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_d15.g1 MSMg01no385_d15.g1 CHROMAT_FILE:
MSMg01no385_d15.g1 PHD_FILE: MSMg01no385_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:27:44 2005
(564 letters)
>mm_chr10_94230018_94230980
Length = 963
Score = 750 bits (388), Expect = 0.0
Identities = 400/404 (99%), Gaps = 2/404 (0%)
Strand = Plus / Minus
Query: 161 cctgtgggcacaacccctttgggggtcaaatgagcccttcacaagggttacatatcagat 220
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 cctgtgggcacaacccctttgggggtcaaatgagcccttcacaagggttacatatcagat 904
Query: 221 atcctgcatatcagatatttatattacaattcataacagtagcaaaatcacagttatgaa 280
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 903 atcctgcatatcagatatttatattacaattcataacagtagc-aaatcacagttatgaa 845
Query: 281 gtaatagcacaattttatggctggggtcaccacatgaggaactgtattaaagggtggcag 340
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 gtaatagcacaattttatggctggggtcaccacatgaggaactgtattaaagggtggcag 785
Query: 341 cattgggaaggttgagaaccaacgatctagagccatttatcagcacaggtatcaaagtca 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 784 cattgggaaggttgagaaccaacgatctagagccatttatcagcacaggtatcaaagtca 725
Query: 401 caggcttgattcacccgaaatttacctttatatggaagcaccttttcttatgataattgg 460
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 caggcttgattcacccgaaatttacctttatatggaagcaccttttcttatgataattgg 665
Query: 461 agttatggaccaactggctagaaagacttaacactttttaaacttgtgactgaatagagc 520
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 664 agttatggaccaactggctagaaagactt-acactttttaaacttgtgactgaatagagc 606
Query: 521 tcactggggacaactatagatctacatccttcatacaccatgtc 564
||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 605 tcactggggacaactatggatctacatccttcatacgccatgtc 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 963
Length adjustment: 10
Effective length of query: 554
Effective length of database: 953
Effective search space: 527962
Effective search space used: 527962
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
