Query= MSMg01no385_l13.b1 MSMg01no385_l13.b1 CHROMAT_FILE:
MSMg01no385_l13.b1 PHD_FILE: MSMg01no385_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:22 2005
(438 letters)
>mm_chr10_94072956_94073793
Length = 838
Score = 760 bits (393), Expect = 0.0
Identities = 428/447 (95%), Gaps = 14/447 (3%)
Strand = Plus / Plus
Query: 5 gaattctctgagtttccagtgtcctgcctgaaactacatggtatctcctctcagagctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgagtttccagtgtcctgcctgaaactacatggtatctcctctcagagctga 264
Query: 65 gactctgaggatttcatggtcctttctaacacatagggg---------gatgtgtgtgtg 115
||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 265 gactctgaggatttcatggtcctttctaacacataggggtgtgtgtgtg-tgtgtgtgtg 323
Query: 116 tgtgtctttgtgtgtatgtctgtatgtatatatctgtgtgtctgtgagtgtgtgtctgtg 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtgtctttgtgtgtatgtctgtatgtatatatctgtgtgtctgtgagtgtgtgtctgtg 383
Query: 176 tgtaagtatgtatctgtgtgtgtaagcttgtatatctgtgtgtgtttgcatgtgtgtctg 235
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 384 tgtaagtatgtatctgtgtgtgtaagcttgtatatctgtgtgtgtttgcacgtgtgtctg 443
Query: 236 tgggtttgtgagcgt----atgtatgtatctgtgtatgtctatgtgtatatatacaaatg 291
||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||
Sbjct: 444 tgggtttgtgagcgtgagtatgtatgtatctgtgtatgtctatgtgcatatatgtaaatg 503
Query: 292 tgtgtggttgtatgtgcatgtgagtgagtatgggttagtgagcatgcatgtgtgattgtg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtgtggttgtatgtgcatgtgagtgagtatgggttagtgagcatgcatgtgtgattgtg 563
Query: 352 tgtgtgtgtctatgtgtgtcagtgtgtatgtatgtctgtgcaggtctgtgtgtatgtcta 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgtgtgtctatgtgtgtcagtgtgtatgtatgtctgtgcaggtctgtgtgtatgtcta 623
Query: 412 tgtgtgtctgtgtgtgtctgtctctat 438
|||||||||||||||| ||||||||||
Sbjct: 624 tgtgtgtctgtgtgtgcctgtctctat 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_l13.g1 MSMg01no385_l13.g1 CHROMAT_FILE:
MSMg01no385_l13.g1 PHD_FILE: MSMg01no385_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:22 2005
(541 letters)
>mm_chr10_94230045_94230984
Length = 940
Score = 721 bits (373), Expect = 0.0
Identities = 379/381 (99%), Gaps = 2/381 (0%)
Strand = Plus / Minus
Query: 157 tcaacctgtgggcacaacccctttgggggtcaaatgagcccttcacaagggttacatatc 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 tcaacctgtgggcacaacccctttgggggtcaaatgagcccttcacaagggttacatatc 881
Query: 217 agatatcctgcatatcagatatttatattacaattcataacagtagcaaaatcacagtta 276
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 880 agatatcctgcatatcagatatttatattacaattcataacagtagc-aaatcacagtta 822
Query: 277 tgaagtaatagcacaattttatggctggggtcaccacatgaggaactgtattaaagggtg 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tgaagtaatagcacaattttatggctggggtcaccacatgaggaactgtattaaagggtg 762
Query: 337 gcagcattgggaaggttgagaaccaacgatctagagccatttatcagcacaggtatcaaa 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 gcagcattgggaaggttgagaaccaacgatctagagccatttatcagcacaggtatcaaa 702
Query: 397 gtcacaggcttgattcacccgaaatttacctttatatggaagcaccttttcttatgataa 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gtcacaggcttgattcacccgaaatttacctttatatggaagcaccttttcttatgataa 642
Query: 457 ttggagttatggaccaactggctagaaagacttaacactttttaaacttgtgactgaata 516
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 641 ttggagttatggaccaactggctagaaagactt-acactttttaaacttgtgactgaata 583
Query: 517 gagctcactggggacaactat 537
|||||||||||||||||||||
Sbjct: 582 gagctcactggggacaactat 562
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 940
Length adjustment: 10
Effective length of query: 531
Effective length of database: 930
Effective search space: 493830
Effective search space used: 493830
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
