TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTTTGTTCTGCCATGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCTT
TTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTAT
GAGGTCCCATTTATCGATTCTTGATCCTACAACACAAGCCATTGCTGTTC
TATTCAGGAATTTTTCCCCTGTTTCCATATCTTCAAGGCTTTTCCCTACT
TTCTCCTCTATAAGTTTCAGCGTCTCTGGTTTTATGTGGAGTTCCTTAAT
CCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATGGATCAATTCGCA
TTCTTCTACATGATAACCGCCAGTTGTGCCAACACCATTTGTTGAAAATG
CTGTCTTTTTTTCCATTGGATGGTATGATGCAGCTCTAAGCCCCTTGACC
TGGGTTTTGTCAACTAAGTAACTCTCACAGTTAATACTTGTCATTATTGA
TGGCCCAGTCCATAATGTTTTTCTCTTTTGCTTGGCGAAGTGATATAGCA
TTTGTTTATAGTTGTCAGCTCACTTTTAACATGGACAGTTTTTGGCTTTT
TTGCCTGGATCATTCTCCTTGTTCCTGCTTTAACATTCTTCT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTCTGTGTAGCACTAGTTGTCATGGAATT
CACTCTATAATCAAGTTGACCTGGAATCAGAGATTTGTCTGCCTCTGCCT
CCTGAGTGCTGGGATTAAAGGAGAGACCCCTGCCCCTGCTCTTTAAGGTC
CAGCTGGAAATGTGTCTGTGTGTAATCTGTCATTGGTATATGAATATTAA
AGAATACTCATATCATAAAAATGAGAAAAATTTAAAAATAATATTCATGA
AAAGAAATAATTTTACAGTTGCACAGTATAATGTTTCTAACAATCTTAGT
CCCTTTGTTTTCTTATATTTAATATACCCTAAATAAATTACATATTAAAT
GTTGAACAAATTCTTCAACTCCATTTCATCAATTCTCCTTAAGAACATTT
TCCACTTCTTATTTTGTCTATTAATAACCATTCTCAGTAACTGTAGTAAC
TTACTTTTGCCATTAAAATGCATTTGGCTTATAATTTCTTCATTCTCATT
GTCTAACTTGTATTGAATCTTTCTTCTCAGTACCTAAAATCTTGAATATT
TCTTTTAGAAAACAGATTTTGGTGTGTTTAGACACAATGAAAATTCTAAC
CTTTTAACATCTTAATTCTTATTATTATTCTTACATGTAGTCTTACCACA
AGCATTTTTGTTTTATTCTACAATCTGCAAGATATTTATT

Query= MSMg01no386_g03.g1 MSMg01no386_g03.g1 CHROMAT_FILE:
MSMg01no386_g03.g1 PHD_FILE: MSMg01no386_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:11 2005
         (616 letters)



>mm_chr10_107149588_107150603
          Length = 1016

 Score = 1145 bits (592), Expect = 0.0
 Identities = 610/616 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctgtgtagcactagttgtcatggaattcactctataatcaagttgacctggaatcagag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 tctgtgtagcactagttgtcatggaattcactctataatcaagttgacctggaatcagag 896

                                                                       
Query: 61  atttgtctgcctctgcctcctgagtgctgggattaaaggagagacccctgcccctgctct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 atttgtctgcctctgcctcctgagtgctgggattaaaggagagacccctgcccctgctct 836

                                                                       
Query: 121 ttaaggtccagctggaaatgtgtctgtgtgtaatctgtcattggtatatgaatattaaag 180
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 ttaaggttcagctggaaatgtgtctgtgtgtaatctgtcattggtatatgaatattaaag 776

                                                                       
Query: 181 aatactcatatcataaaaatgagaaaaatttaaaaataatattcatgaaaagaaataatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 aatactcatatcataaaaatgagaaaaatttaaaaataatattcatgaaaagaaataatt 716

                                                                       
Query: 241 ttacagttgcacagtataatgtttctaacaatcttagtccctttgttttcttatatttaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttacagttgcacagtataatgtttctaacaatcttagtccctttgttttcttatatttaa 656

                                                                       
Query: 301 tataccctaaataaattacatattaaatgttgaacaaattcttcaactccatttcatcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tataccctaaataaattacatattaaatgttgaacaaattcttcaactccatttcatcaa 596

                                                                       
Query: 361 ttctccttaagaacattttccacttcttattttgtctattaataaccattctcagtaact 420
           |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 595 ttcttcttaagaacattttccacttattattttgtctattaataaccattctcagtaact 536

                                                                       
Query: 421 gtagtaacttacttttgccattaaaatgcatttggcttataatttcttcattctcattgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gtagtaacttacttttgccattaaaatgcatttggcttataatttcttcattctcattgt 476

                                                                       
Query: 481 ctaacttgtattgaatctttcttctcagtacctaaaatcttgaatatttcttttagaaaa 540
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 475 ctaacttgtattgaatctttcttctcagtacctaaaatcttgaatagttcttttagaaaa 416

                                                                       
Query: 541 cagattttggtgtgtttagacacaatgaaaattctaaccttttaacatcttaattcttat 600
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 415 cagattttggtgtgtttagacacaatgaaaattctaaccttttaaaatcttaattcttat 356

                           
Query: 601 tattattcttacatgt 616
           ||||||||||| ||||
Sbjct: 355 tattattcttagatgt 340


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)