Query= MSMg01no386_p18.b1 MSMg01no386_p18.b1 CHROMAT_FILE:
MSMg01no386_p18.b1 PHD_FILE: MSMg01no386_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:54 2005
(555 letters)
>mm_chr10_85472344_85473296
Length = 953
Score = 1031 bits (533), Expect = 0.0
Identities = 549/555 (98%), Gaps = 2/555 (0%)
Strand = Plus / Minus
Query: 1 tagatgaaaatgaaaacctggcatctaccaactcatttgatgggaaaaaaaaaagtcaat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 698 tagatgaaaatgaaaacctggcatctaccaactcatttgatggg--gaaaaaaagtcaat 641
Query: 61 aattctagaattaggaacgagaagcagaagatatgattctcaggtgtctgtggaactaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 aattctagaattaggaacgagaagcagaagatatgattctcaggtgtctgtggaactaaa 581
Query: 121 ggagtctccatttctgtgtgcctctttagtccccttttctagaccctctcatgtagttag 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 580 ggagtctccatttctgtgtgcctcttttgtccccttttctagaccctctcatgtagttag 521
Query: 181 gatcttactgaggtcttattccctcagtttcaaacagttgagttggttcaggcttttctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 gatcttactgaggtcttattccctcagtttcaaacagttgagttggttcaggcttttctc 461
Query: 241 gttgcttctctctgctatgaaaaataatttgctctttgacaaaaatccctctagtgccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gttgcttctctctgctatgaaaaataatttgctctttgacaaaaatccctctagtgccca 401
Query: 301 cttcagagggacatttccacttccaacctttacctctagtcatgctaatgtggtcaccag 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 400 cttcagagggacatttccacttccaacctttgcctctagtcatgctaatgtggtcaccag 341
Query: 361 cagcatggcctccccatttgataaaatgtggaaatactctgtagcaattggtaaatagcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 cagcatggcctccccatttgataaaatgtggaaatactctgtagcaattggtaaatagcc 281
Query: 421 actaatctaagggcctgggatgttcctctcactgccactagcccatccctctgggcccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 actaatctaagggcctgggatgttcctctcactgccactagcccatccctctgggcccaa 221
Query: 481 tctgcactccagaatccctcgtgtgtgtatgcatgtgtgtgtgtgtgtgtgtgtgtgtgt 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 220 tctgcactccagaatccctcctgtgtgtatgcatgtgtgtgtgtgtgtgtgtgtgtgtgt 161
Query: 541 gtgtgtgtgtgtgtg 555
|||||||||||||||
Sbjct: 160 gtgtgtgtgtgtgtg 146
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 59
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 953
Length adjustment: 10
Effective length of query: 545
Effective length of database: 943
Effective search space: 513935
Effective search space used: 513935
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no386_p18.g1 MSMg01no386_p18.g1 CHROMAT_FILE:
MSMg01no386_p18.g1 PHD_FILE: MSMg01no386_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:29:54 2005
(629 letters)
>mm_chr10_85324926_85325954
Length = 1029
Score = 1168 bits (604), Expect = 0.0
Identities = 625/636 (98%), Gaps = 7/636 (1%)
Strand = Plus / Plus
Query: 1 tagagataccagggctagcaggggagagaggagagaaattcccgatcagtacccccatgc 60
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 194 tagagataccagggctagcaggggagagaggagagaacttcctgatcagtacccccatgc 253
Query: 61 caccctgtagggtgtttttttttt-------aagagtagaaagagatatctaagacactg 113
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 254 caccctgtagggtgtttttttttttttttttaagagtagaaagagatatctaagacactg 313
Query: 114 aaaataattcctcaaggtcactgagtctttgagcctttgagttggacaggaagcacacat 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 314 aaaataattcctcaaggtcactgagtctttgagcctttgagttggacaggaagcacacct 373
Query: 174 caagtgctaaagaacaacacaggtctgggagggatgcctgcctggtgacactgtttacct 233
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caagtgctaaagaacaacacaggtctgggagggatgcctgcctggtgacactgtttacct 433
Query: 234 agaatccccactggctttgaaacacatacaggtatatgtgaaagaggttggacccccaca 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 agaatccccactggctttgaaacacatacaggtatatgtgaaagaggttggacccccaca 493
Query: 294 gctggaacagggtctctagattctgggatgccaccatgatctccatttctggctgcccct 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 494 gctggaacagggtctctagattctgggatgccaccatgatctccatttctggctgtccct 553
Query: 354 gccctatcccactgttctgctcaccaccttatgctttcctgtcctcagtgcgcaggggag 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 gccctatcccactgttctgctcaccaccttatgctttcctgtcctcagtgcgcaggggag 613
Query: 414 tgcacctttcaggtctttcccatgtgtgcatcattgagacctccagagcctgagtgctat 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tgcacctttcaggtctttcccatgtgtgcatcattgagacctccagagcctgagtgctat 673
Query: 474 tttgagtttcaggatatttcacctaaagccaacttacacacagcttccccttgggtgagc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tttgagtttcaggatatttcacctaaagccaacttacacacagcttccccttgggtgagc 733
Query: 534 acacacaaactgggaaatgcagagtgtaatataaaacatatagactttggcatggccatc 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 acacacaaactgggaaatgcagagtgtaatataaaacatatagactttggcatggccatc 793
Query: 594 aagtgcagacctggcaccttcctgaagtggcagttg 629
||||||||||||||||||||||||||||||||||||
Sbjct: 794 aagtgcagacctggcaccttcctgaagtggcagttg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1029
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1019
Effective search space: 630761
Effective search space used: 630761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
