Query= MSMg01no387_o02.b1 MSMg01no387_o02.b1 CHROMAT_FILE:
MSMg01no387_o02.b1 PHD_FILE: MSMg01no387_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:04 2005
(194 letters)
>mm_chr10_117507356_117507945
Length = 590
Score = 244 bits (126), Expect = 3e-69
Identities = 138/144 (95%), Gaps = 4/144 (2%)
Strand = Plus / Plus
Query: 1 ctgttgatgaaaaattaagacaagaaaaatctgtgccttgttttattttatatttctgcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttgatgaaaaattaagacaagaaaaatctgtgccttgttttattttatatttctgcc 260
Query: 61 tctgaattttgttaatgagtggctgaggcggtaaccagtttcttgtgtttcctttatctt 120
|||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||
Sbjct: 261 tctgaattttgttaatgagtggctgaggtggtatccagtttcttgtgtttcct----ctt 316
Query: 121 tccctccctcttcttctcctagcc 144
||||||||||||||||||||||||
Sbjct: 317 tccctccctcttcttctcctagcc 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 590
Length adjustment: 8
Effective length of query: 186
Effective length of database: 582
Effective search space: 108252
Effective search space used: 108252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no387_o02.g1 MSMg01no387_o02.g1 CHROMAT_FILE:
MSMg01no387_o02.g1 PHD_FILE: MSMg01no387_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:04 2005
(376 letters)
>mm_chr10_117703336_117704111
Length = 776
Score = 704 bits (364), Expect = 0.0
Identities = 373/376 (99%)
Strand = Plus / Plus
Query: 1 catccatgtgggagactggttctgggaaatcaacagcacatccatccggaatatgctgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catccatgtgggagactggttctgggaaatcaacagcacatccatccggaatatgctgct 260
Query: 61 ggccgagatccaggagaccagctgcctactccagctgacccttcagcatgacccctgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggccgagatccaggagaccagctgcctactccagctgacccttcagcatgacccctgtga 320
Query: 121 ctcatcggatcccagccccctgagctccccagtacacactcccagcagacaggcaggcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcatcggatcccagccccctgagctccccagtacacactcccagcagacaggcaggcag 380
Query: 181 ctctgcccagcagaaaccggtctagaggagctgaagtattgacatgtccctgggtgccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctgcccagcagaaaccggtctagaggagctgaagtattgacatgtccctgggtgccat 440
Query: 241 ctcactagcctctccagcctcctagcacaaggatctggatcgttctgaatccctctgcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcactagcctctccagcctcctagcacaaggatctggatcgttctgaatccctctgcag 500
Query: 301 accacaccacatcttccagctgtctgacctcatctatagggaggtgttgagctcttaagg 360
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 accacaccacatctcccggctgtctgacctcatctatagggaggtgttgagctcttaagg 560
Query: 361 ccaggccatcaaggtg 376
|||| |||||||||||
Sbjct: 561 ccagtccatcaaggtg 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
