Query= MSMg01no388_c20.b1 MSMg01no388_c20.b1 CHROMAT_FILE:
MSMg01no388_c20.b1 PHD_FILE: MSMg01no388_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:27 2005
(476 letters)
>mm_chr10_120159674_120160549
Length = 876
Score = 920 bits (476), Expect = 0.0
Identities = 476/476 (100%)
Strand = Plus / Plus
Query: 1 ataaaaaatcttggcttcccattttaattcaaagacaaggtgagaggctttccttgtaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataaaaaatcttggcttcccattttaattcaaagacaaggtgagaggctttccttgtaag 260
Query: 61 aggagccagcaaggaacactctctggctccttctgttagggggccttgccctcctcccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggagccagcaaggaacactctctggctccttctgttagggggccttgccctcctcccaa 320
Query: 121 gctctgcggcctgggtacctttgatgtccaggctgcctccgacctcatctcagcaggatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctgcggcctgggtacctttgatgtccaggctgcctccgacctcatctcagcaggatg 380
Query: 181 ctctccttgatcccttccaacctccccacccaaggtcctcctgagtgtgggaaagtgggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctccttgatcccttccaacctccccacccaaggtcctcctgagtgtgggaaagtgggt 440
Query: 241 ggagcagagtagcgcatctgaggtctctcagcctgcagggctttcggagtgaggggccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagcagagtagcgcatctgaggtctctcagcctgcagggctttcggagtgaggggccag 500
Query: 301 gtcagcaggaaggtgcaaaaggatggagtggagacggaaagacagaaaagatggaatgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtcagcaggaaggtgcaaaaggatggagtggagacggaaagacagaaaagatggaatgga 560
Query: 361 cagagccaagggcccagccagagcttcccacggcactcaccacaaggtactggctgtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagagccaagggcccagccagagcttcccacggcactcaccacaaggtactggctgtatt 620
Query: 421 tggtgtggtctccgacccccagttccatcccatttacaactgcttaaacagccctg 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggtgtggtctccgacccccagttccatcccatttacaactgcttaaacagccctg 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 876
Length adjustment: 10
Effective length of query: 466
Effective length of database: 866
Effective search space: 403556
Effective search space used: 403556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no388_c20.g1 MSMg01no388_c20.g1 CHROMAT_FILE:
MSMg01no388_c20.g1 PHD_FILE: MSMg01no388_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:31:27 2005
(339 letters)
>mm_chr10_120348270_120349008
Length = 739
Score = 576 bits (298), Expect = e-169
Identities = 327/344 (95%), Gaps = 13/344 (3%)
Strand = Plus / Minus
Query: 1 ccgattggaagttagacattgaaagtcaatcctgatagctggatgtaaggatgaacacct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ccgattggaagttagacattgaaagtcaatcctgatagctggatgtaaggatgaacaccg 383
Query: 61 gtaaaagcagcgactactgctgtaaatcgaagccaaagttttaggagaattctgtgtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtaaaagcagcgactactgctgtaaatcgaagccaaagttttaggagaattctgtgtgga 323
Query: 121 ccgcttgttttctgccatctggggtagttgctgggaactgagtccttttgtctgagaaag 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 ccgcttgttttctgccatctggggtagttgctgggaactgagtccctttgtctgagaaag 263
Query: 181 agcccagaatattaaagtgcctagatagttctgcctttcagacagtatcaggatctgact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agcccagaatattaaagtgcctagatagttctgcctttcagacagtatcaggatctgact 203
Query: 241 g------atttttttcaaacttagagttaaccaaatcatcaccagacaattgtttccatg 294
| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gagagaca-------caaacttagagttaaccaaatcatcaccagacaattgtttccatg 150
Query: 295 aatgacgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 338
||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 149 aatgatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 106
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
