XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTCCA
GAGAGGAAGCGTCTCTGGTGATGGCTAAGTGAGATGCTGATCTACAGGTA
TAGCAGCATGTCATTAGGAGTCATTGCTACATTCCTTTAGCAGAGCAATA
GTATTTGGTTTTCCCCTAAGTCCATGGTCTATCTAGTCTCACATTCTTGG
CCACTCGAATAGTGGCCATCTCCATCTCGTGGTGTAGGCCTTAAATCCAA
CAGAGAATGGTTGGTTACTCCCACAGTGTGTCTGCCACCACTGTACCAGC
ATACCATGCAGATTTGAAACAACACTTGGGAAAGTGTTCTGTGTCCTCTT
ATTATAGCTGGTCTCTTCTGGATAAATAGGATTAGGACTAAGCCCACATA
GTAAAGTTAAAAGAATATCATAATATTAAGAATACAATGGTTGAGCATCT
CCAGCTAGAATCTCTGTGTTCTAGATCAAATCAGACATTCTGTCACAATA
CCTGAAATAAATACCAGCCATCTTAATGAAAAACACGTTCAGCTTCTAGC
AGAGATGTGTATTCTTATTGATGAAAATGACAATAAAATTGGGGCTGACA
CCAAGAAAAATTGTCACCTTAATGAANACATCGACCAAGGATTAATACAT
CGAGCTTTTCGTGTCTTCTTGTTAATACTGGAAATTAGCTCCTGTTACAG
CAGAGATCAGATGCTAAAACTACCTTTCCGGTTTGTTCACCAATGGTTGG
TGTAGTCCC

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
TTTCTCGCGGAATTCCAGGGATTAAGTGGGCATTCATAAGCAGAGGTTGA
TGCTAATTTTACTGCAGATGAGACTGTTTGCAGGGGAGTTAAGAAAGCGG
TTGGCTCAGCTGAGACCTATGTCCTGTCACTGGGCTTTGGTGGCAATGCC
GAGTCCCGTGGTGAGATCTGGTTTTTATGAAGCAGGAGGGGCTGTAACAG
ATTTGGATGGTTTAAATTGATATGTAAATTGGGTTCATAAAGTGCTAAAG
AAGTAATTTATTTTTAGGAAAAGGAAAAAGCAGGTGAAGGGCCAAATCAC
TAAAAAGGAAAAGCGAGGAAGATTTGCGAGGATCTGGAATCTCTAAGAAC
AGAAATCCATAGCCAAATTCAATGCTTGGGAAACACAGAGATGTTCAAAG
CAAATGTTCAATGCAGACAAAAATGGTAGAGCTGTTCAGTGCAGACACTA
AGTACATCCCAGGGGTAAAAATTGTTTCTGCATCCAGGGTCCCCTCAACA
GCCATGTAGCCAGGGGCAGCAGGTAGCCACAGCATGGGCCAAAAGGCTTT
CAGACTTGGGGGTCCTATATCAGCATAGCGGTGGAAACATAGCATGCTTT
CCTTTGTGCCTGTGTTGGTCCGAACCAACAATCCCAGCTCCACCAAGCCT
GGAATTGGGTAAGTGCATGGCACTCCTTGTGGCAAGAACCCAGACTTGAA
AG

Query= MSMg01no388_l02.b1 MSMg01no388_l02.b1 CHROMAT_FILE:
MSMg01no388_l02.b1 PHD_FILE: MSMg01no388_l02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:05 2005
         (567 letters)



>mm_chr10_39630292_39631258
          Length = 967

 Score = 1019 bits (527), Expect = 0.0
 Identities = 554/563 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctccagagaggaagcgtctctggtgatggctaagtgagatgctgatctacaggt 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctccagagagaaagcgtctctggtgatggctaagtgagatgctgatctacaggt 264

                                                                       
Query: 65  atagcagcatgtcattaggagtcattgctacattcctttagcagagcaatagtatttggt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atagcagcatgtcattaggagtcattgctacattcctttagcagagcaatagtatttggt 324

                                                                       
Query: 125 tttcccctaagtccatggtctatctagtctcacattcttggccactcgaatagtggccat 184
           |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 tttcccctaagtccatagtctatctagtctcacattcttggccactcaaatagtggccat 384

                                                                       
Query: 185 ctccatctcgtggtgtaggccttaaatccaacagagaatggttggttactcccacagtgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 385 ctccatctcgtggtgtaggccttaaatccaacagagaatggttggttactcccacggtgt 444

                                                                       
Query: 245 gtctgccaccactgtaccagcataccatgcagatttgaaacaacacttgggaaagtgttc 304
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 445 gtctgccaccactgtaccagcataccatgcagatttgaaacaacacttggaaaagtgttc 504

                                                                       
Query: 305 tgtgtcctcttattatagctggtctcttctggataaataggattaggactaagcccacat 364
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtgtcctcttattatagctagtctcttctggataaataggattaggactaagcccacat 564

                                                                       
Query: 365 agtaaagttaaaagaatatcataatattaagaatacaatggttgagcatctccagctaga 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agtaaagttaaaagaatatcataatattaagaatacaatggttgagcatctccagctaga 624

                                                                       
Query: 425 atctctgtgttctagatcaaatcagacattctgtcacaatacctgaaataaataccagcc 484
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 atctctgtgttctagatcaaatcagacattctgtcacaatgcctgaaataaataccagcc 684

                                                                       
Query: 485 atcttaatgaaaaacacgttcagcttctagcagagatgtgtattcttattgatgaaaatg 544
           |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atcttaatgagaaacaggttcagcttctagcagagatgtgtattcttattgatgaaaatg 744

                                  
Query: 545 acaataaaattggggctgacacc 567
           |||||||||||||||||||||||
Sbjct: 745 acaataaaattggggctgacacc 767


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no388_l02.g1 MSMg01no388_l02.g1 CHROMAT_FILE:
MSMg01no388_l02.g1 PHD_FILE: MSMg01no388_l02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:05 2005
         (615 letters)



>mm_chr10_39748030_39749044
          Length = 1015

 Score =  659 bits (341), Expect = 0.0
 Identities = 347/349 (99%)
 Strand = Plus / Minus

                                                                        
Query: 267  ggaaaaggaaaaagcaggtgaagggccaaatcactaaaaaggaaaagcgaggaagatttg 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 ggaaaaggaaaaagcaggtgaagggccaaatcactaaaaaggaaaagcgaggaagatttg 956

                                                                        
Query: 327  cgaggatctggaatctctaagaacagaaatccatagccaaattcaatgcttgggaaacac 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  cgaggatctggaatctctaagaacagaaatccatagccaaattcaatgcttgggaaacac 896

                                                                        
Query: 387  agagatgttcaaagcaaatgttcaatgcagacaaaaatggtagagctgttcagtgcagac 446
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 895  agagatgttcaaagcaaacgttcaatgcagacaaaaatggtagagctgttcagtgcagac 836

                                                                        
Query: 447  actaagtacatcccaggggtaaaaattgtttctgcatccagggtcccctcaacagccatg 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835  actaagtacatcccaggggtaaaaattgtttctgcatccagggtcccctcaacagccatg 776

                                                                        
Query: 507  tagccaggggcagcaggtagccacagcatgggccaaaaggctttcagacttgggggtcct 566
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 775  tagccaggggcagcaggtagccacagcatgggccaaaaggctttcagactcgggggtcct 716

                                                             
Query: 567  atatcagcatagcggtggaaacatagcatgctttcctttgtgcctgtgt 615
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715  atatcagcatagcggtggaaacatagcatgctttcctttgtgcctgtgt 667


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space:   608025
Effective search space used:   608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)