Query= MSMg01no389_c20.b1 MSMg01no389_c20.b1 CHROMAT_FILE:
MSMg01no389_c20.b1 PHD_FILE: MSMg01no389_c20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:41 2005
(402 letters)
>mm_chr10_66941139_66941939
Length = 801
Score = 741 bits (383), Expect = 0.0
Identities = 398/403 (98%), Gaps = 3/403 (0%)
Strand = Plus / Plus
Query: 1 taagtgtgctcaattttattggcttttcttcttgagatggatacctaagccatttccatt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 taagtgtgctcaattttattggcttttcttcttgagatggatacctaagccatttcca-t 259
Query: 61 ttttttcttgtttagataatgctttagagagaaccaggcacatatgtcacaagaccttca 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ttttttcttgttcagataatgctttagagagaaccaggcacatatgtcacaagaccttca 319
Query: 121 aaaccctgagaggcagagtggagaattttatgttttttaatgc-agtttcccttagcgta 179
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 320 aaaccctgagaggcagagtggagaattttatgttttttaatgcca-tttcccttagcgta 378
Query: 180 ggccctgtgtacaacggaccatcaattcatacattaatgcatacgagttgcaacaactgt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggccctgtgtacaacggaccatcaattcatacattaatgcatacgagttgcaacaactgt 438
Query: 240 gtgtataaccagttggtcattaggttttcaaaagatgctgtgtgggcaacagctgtctgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gtgtataaccagttggtcattaggttttcaaaagatgctgtgtgggcaacagctgtctgg 498
Query: 300 ctgacaaggtccagtccatttggtatctcgaaaggggcctgttctcttccctaagagggc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gtgacaaggtccagtccatttggtatctcgaaaggggcctgttctcttccctaagagggc 558
Query: 360 agtaagagttgttcttctgcacacgagagagggagttcctggg 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 agtaagagttgttcttctgcacacgagagagggagttcctggg 601
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 801
Length adjustment: 9
Effective length of query: 393
Effective length of database: 792
Effective search space: 311256
Effective search space used: 311256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_c20.g1 MSMg01no389_c20.g1 CHROMAT_FILE:
MSMg01no389_c20.g1 PHD_FILE: MSMg01no389_c20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:41 2005
(264 letters)
>mm_chr10_67115480_67116143
Length = 664
Score = 495 bits (256), Expect = e-144
Identities = 259/260 (99%)
Strand = Plus / Minus
Query: 1 tcaaatggatcacttattacagaaagtattccataagcttaaaagttgggaatcttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaatggatcacttattacagaaagtattccataagcttaaaagttgggaatcttagct 262
Query: 61 gagcaatgtccccttttggtaacaatccatctattccagggagagataacaaagtataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagcaatgtccccttttggtaacaatccatctattccagggagagataacaaagtataag 202
Query: 121 agaggctagagagatggctcagcagttaagagcattccctgccctttcagaggacccggg 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggctagagaggtggctcagcagttaagagcattccctgccctttcagaggacccggg 142
Query: 181 ttggactcccaccaaacgcatagcagaccacagtggtctaaactacagttccaggcaagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 ttggactcccaccaaacgcatagcagaccacagtggtctaaactacagttccaggcaagc 82
Query: 241 caatgcccccctggggcccc 260
||||||||||||||||||||
Sbjct: 81 caatgcccccctggggcccc 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
