Query= MSMg01no389_p21.b1 MSMg01no389_p21.b1 CHROMAT_FILE:
MSMg01no389_p21.b1 PHD_FILE: MSMg01no389_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:45 2005
(317 letters)
>mm_chr10_101661570_101662287
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Plus
Query: 1 atatttcatgggcaaataaacaagctgagaaggcacccaggaaactaaaggtcctgaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatttcatgggcaaataaacaagctgagaaggcacccaggaaactaaaggtcctgaaat 260
Query: 61 acataggtgaggacaaatcaga-aaaactctttaacatggacccgtattctcatgatagg 119
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 acataggtgaggacaaatcagagaaaactctttaacatggacccgtattctcatgatagg 320
Query: 120 tataaacctaaggcatgcatatcagttgtggaaaactgaaaaataattacatcaaagtag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tataaacctaaggcatgcatatcagttgtggaaaactgaaaaataattacatcaaagtag 380
Query: 180 tgatgatattgttcttgtgatgctgaatgtatgttaccatcattttatttttcactatta 239
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 tgacgatattgttcttgtgatgctgaatatatgttaccatcattttatttttcactatta 440
Query: 240 ctgtggttatattgattggttacttttaagaattacctgtgttaatctatatgttgtagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtggttatattgattggttacttttaagaattacctgtgttaatctatatgttgtagt 500
Query: 300 ggaagtagtgttgattgt 317
||||||||||||||||||
Sbjct: 501 ggaagtagtgttgattgt 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 718
Length adjustment: 9
Effective length of query: 308
Effective length of database: 709
Effective search space: 218372
Effective search space used: 218372
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_p21.g1 MSMg01no389_p21.g1 CHROMAT_FILE:
MSMg01no389_p21.g1 PHD_FILE: MSMg01no389_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:45 2005
(482 letters)
>mm_chr10_101792675_101793556
Length = 882
Score = 683 bits (353), Expect = 0.0
Identities = 368/373 (98%)
Strand = Plus / Minus
Query: 110 attatcaaagtggaaacaggcagagatggtgcagtagaagctcagagttctatatcttta 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 attatcaaagtggaaacaggcagagatggtgcagtagaagctcagagttctatatcttta 823
Query: 170 tctgaaggcagatagcagaatacttgtctccaggcaggtaggatgagaatctttaagccc 229
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tctaaaggcagatagcagaatacttgtctccaggcaggtaggatgagaatctttaagccc 763
Query: 230 atgttcacattgacatatctactttaacagggccacaccttctaatagtgcaatttctgg 289
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 762 atgttcacattgacatatctactccaacagggccacaccttctaatagtgcaatttctgg 703
Query: 290 gctaagcacatacaaaccattgtactatgttatcgagaaatttgtaacattcctttctaa 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gctaagcacatacaaaccattgtactatgttatcgagaaatttgtaacattcctttctaa 643
Query: 350 cttgtaatagatatacctgctaccataaattttatagaaagacacaatgtgagctagatg 409
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cttgtaatagatatacctactaccataaattttatagaaagacacaatgtgagctagatg 583
Query: 410 ccagtttctatttgtttcagtagtttgtataaactatatgattttctctaacaatatatg 469
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ccagtttctatttatttcagtagtttgtataaactatatgattttctctaacaatatatg 523
Query: 470 aaaatattttaga 482
|||||||||||||
Sbjct: 522 aaaatattttaga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
