Query= MSMg01no390_h02.b1 MSMg01no390_h02.b1 CHROMAT_FILE:
MSMg01no390_h02.b1 PHD_FILE: MSMg01no390_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:21 2005
(490 letters)
>mm_chr10_96946241_96947129
Length = 889
Score = 926 bits (479), Expect = 0.0
Identities = 485/487 (99%), Gaps = 1/487 (0%)
Strand = Plus / Minus
Query: 1 tttttactttcaaacagataagccagctctctttagtgtattgagctgaagtttcagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 tttttactttcaaacagataagccagctctctttagtgtattgagctgaagtttcagaac 627
Query: 61 atgagattatatcagatatttacattgtgctttagttataaatattcctgttgaatagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 atgagattatatcagatatttacattgtgctttagttataaatattcctgttgaatagtt 567
Query: 121 ctaaagaccataatcggctgccaaagctacatgggaatccagaccagagaatgcagggaa 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 566 ctaaagaccataatcggctgccaaagctacatgggaacccagaccagagaatgcagggaa 507
Query: 181 tgcctgtgcatcttgaagataattttttgttgcacaatccatctcattttgcttctgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tgcctgtgcatcttgaagataattttttgttgcacaatccatctcattttgcttctgata 447
Query: 241 actatgcattttgcaagttagtcacgtttaatctctgttgcctggaacctgtaaagagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 actatgcattttgcaagttagtcacgtttaatctctgttgcctggaacctgtaaagagta 387
Query: 301 aagggactttccaagttttcatagtatctaacactttaggaaaccaaatcaaaaatttag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aagggactttccaagttttcatagtatctaacactttaggaaaccaaatcaaaaatttag 327
Query: 361 aaaaagaaacaaaaatgaaaatgggaaagaataaacatccccctggaaacacaatataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aaaaagaaacaaaaatgaaaatgggaaagaataaacatccccctggaaacacaatataga 267
Query: 421 tgatgtattggtagacattttactttgcaaaaaggggatctattcaagtcattaagattt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 266 tgatgtattggtagacattttactttgcaaaaaggggatctattcaagtcattaag-ttt 208
Query: 481 tttttta 487
|||||||
Sbjct: 207 tttttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_h02.g1 MSMg01no390_h02.g1 CHROMAT_FILE:
MSMg01no390_h02.g1 PHD_FILE: MSMg01no390_h02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:21 2005
(595 letters)
>mm_chr10_96813748_96814742
Length = 995
Score = 1129 bits (584), Expect = 0.0
Identities = 592/595 (99%)
Strand = Plus / Plus
Query: 1 accctggcttatgagttggactaacatattatgtcttaaaacaccaaccctatttttaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctggcttatgagttggactaacatattatgtcttaaaacaccaaccctatttttaat 260
Query: 61 gacttttttttataactcactaatgcataagttggagcctggatgttagtcatcatataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacttttttttataactcactaatgcataagttggagcctggatgttagtcatcatataa 320
Query: 121 tgaggattatgtagccagcaggtagatgatggcttgaagacatagcagcctttaatgtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaggattatgtagccagcaggtagatgatggcttgaagacatagcagcctttaatgtac 380
Query: 181 tccagcaaaacacatgggaaaggtggtctcaaggatggtttgtggcagactttgttcctt 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccagcaaaacacaggggaaaggtggtctcaaggatggtttgtggcagactttgttcctt 440
Query: 241 aaagaacataacaatctctgggaaaggtagttgtagataaaaaatgacttgcctagatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagaacataacaatctctgggaaaggtagttgtagataaaaaatgacttgcctagatgt 500
Query: 301 ttctgcttgatctaggactgaaatagtcttgtccattgctcttttaggtggcaaagacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctgcttgatctaggactgaaatagtcttgtccattgctcttttaggtggcaaagacat 560
Query: 361 gtcctaccctctaccccaagaaaaatctagaaggtgtgccctaatttggggcactgaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcctaccctctaccccaagaaaaatctagaaggtgtgccctaatttggggcactgaaat 620
Query: 421 atattattttatgatatataaatatgatataaaaatcttatacattgtctataacaggaa 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 atattattttatgatatataaatatgatataaaaatattatacattgtctataacaggaa 680
Query: 481 tgatttctgcttcatgaatactgtaaatatgtacatatacatctttggnggatgttgaca 540
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 681 tgatttctgcttcatgaatactgtaaatatgtacatatacatctttgggggatgttgaca 740
Query: 541 ggttgtctctttgatcagcctctaatctatatgtccttatcaacaaaatcatgac 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggttgtctctttgatcagcctctaatctatatgtccttatcaacaaaatcatgac 795
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
