Query= MSMg01no390_k09.b1 MSMg01no390_k09.b1 CHROMAT_FILE:
MSMg01no390_k09.b1 PHD_FILE: MSMg01no390_k09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:38 2005
(289 letters)
>mm_chr10_32372961_32373649
Length = 689
Score = 528 bits (273), Expect = e-154
Identities = 285/289 (98%)
Strand = Plus / Minus
Query: 1 taatagagtgtgtttaccagtttcatccaatccctttgtccctaacatctagaactgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 taatagagtgtgtttaccagtttcatccaatccctttgtccctaacatctagaactgttt 430
Query: 61 ttgaaactaaataagaaggaactatttatgctcaaagagagccaaataattctaagtcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttgaaactaaataagaaggaactatttatgctcaaagagagccaaataattctaagtcct 370
Query: 121 cacattgtaagcacagagctctgtattttatatgtttttgtgcagaattcttgagaccat 180
|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 369 cacattgtaagcacagagctctgtattttatatgggtctgtgcagaattcttgagaccat 310
Query: 181 tggtttggtaaatggtaaaagtgaaaatcatctcctattccccaaagagctaagtaccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tggtttggtaaatggtaaaagtgaaaatcatctcctattccccaaagagctaagtaccac 250
Query: 241 caggggctctgggcaggagaggaaatggtgtgggcagccgttttagagg 289
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 caggggccctgggcaggagaggaaatggtgtgggcagccgttttagagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_k09.g1 MSMg01no390_k09.g1 CHROMAT_FILE:
MSMg01no390_k09.g1 PHD_FILE: MSMg01no390_k09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:38 2005
(446 letters)
>mm_chr10_32184311_32185156
Length = 846
Score = 748 bits (387), Expect = 0.0
Identities = 431/451 (95%), Gaps = 10/451 (2%)
Strand = Plus / Plus
Query: 1 aaattcctagacaaatataaaaatctttctacagaataaattctaggaaaattcagtgac 60
||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 aaatttctagacaaatataaaaatctttctacagaataaattctaggaaaatccagtgac 260
Query: 61 acgaaaatcaggggactttacgttgctagcataaagtggagcatgtgctatatacctcca 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acgaaagtcaggggactttacgttgctagcataaagtggagcatgtgctatatacctcca 320
Query: 121 actcaactccacattcagcagaataattacaattctggacataatatgtacaccatataa 180
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 tctcaactccacattcagcagaataattacaattctggacataatatgaacaccatataa 380
Query: 181 atagtatttatattacatttttttcaattcttatgcttatttctctattttcatatcctg 240
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 381 atagtatttatattacatttttttcaattcttattcttatttttctattttcatatcctg 440
Query: 241 attttttttaa-----gaaattattttggtccatagtttgtgaaattctgtttacatgct 295
|||| || |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 attt-----aacaaaagaaattattttggtccatagtttgtgaaattctgtttacatggt 495
Query: 296 aaactaatcacaggtacttgtcctcagtagtcacatatcttacttagccacactttctga 355
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aaactaaccacagttacttgtcctcagtagtcacatatcttacttagccacactttctga 555
Query: 356 ttcctaacagtaactctcataccagaatttaattttcaacaaactcgcacagactctgag 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttcctaacagtaactctcataccagaatttaattttcaacaaactcgcacagactctgag 615
Query: 416 ttctagaactacacttcccattatactagac 446
|||||||||||||||||||||||||||||||
Sbjct: 616 ttctagaactacacttcccattatactagac 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
