Query= MSMg01no390_n02.b1 MSMg01no390_n02.b1 CHROMAT_FILE:
MSMg01no390_n02.b1 PHD_FILE: MSMg01no390_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:51 2005
(440 letters)
>mm_chr10_25373821_25374659
Length = 839
Score = 797 bits (412), Expect = 0.0
Identities = 433/440 (98%), Gaps = 1/440 (0%)
Strand = Plus / Minus
Query: 1 ccattttttaatggggttatttgattttctggagtccaccttcttgagttctttatatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 ccattttttaatggggttatttgattttctggagtccaccttcttgagttctttatatat 760
Query: 61 attcgatattagtcccctatctgatttaggataggtaaagatcctttcccaatctgttgg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 attggatattagtcccctatctgatttaggataggtaaagatcctttcccaatctgttgg 700
Query: 121 tgtcttttttgtcttattgactgtgtcttttgccttgcagaagctttgcaactttatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tgtcttttttgtcttattgactgtgtcttttgccttgcagaagctttgcaactttatgag 640
Query: 181 tgcatggggacagtcttactgctgccatttgctgccttgagcttcttattatcatcaaaa 240
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 639 tgcatggggacagtcttactgctgccatttgctgtcttaagcttcttattatcatcaaaa 580
Query: 241 aaaatgcatgtctgagctggaacctggctcctcctctacgtccaaggggctgcaaccaga 300
||| |||||| |||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 579 aaa-tgcatgcctgagctggaacctggctactcctctatgtccaaggggctgcaaccaga 521
Query: 301 tcaaaccattgtgagctgaaaccttaccagtgagaagaagcacatttaccacatccaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tcaaaccattgtgagctgaaaccttaccagtgagaagaagcacatttaccacatccaatg 461
Query: 361 ctgactctcatcacttggtgacatggtacactagagagtgttggctgtgtcctttgtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctgactctcatcacttggtgacatggtacactagagagtgttggctgtgtcctttgtgac 401
Query: 421 tgtgtgcctgactatgagct 440
||||||||||||||||||||
Sbjct: 400 tgtgtgcctgactatgagct 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 839
Length adjustment: 9
Effective length of query: 431
Effective length of database: 830
Effective search space: 357730
Effective search space used: 357730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_n02.g1 MSMg01no390_n02.g1 CHROMAT_FILE:
MSMg01no390_n02.g1 PHD_FILE: MSMg01no390_n02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:51 2005
(551 letters)
>mm_chr10_25192792_25193742
Length = 951
Score = 1033 bits (534), Expect = 0.0
Identities = 550/562 (97%), Gaps = 11/562 (1%)
Strand = Plus / Plus
Query: 1 tggtgactgaagttctgagaaatttccactttcacaaagcctgattctttttggaaaagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tggtgactgaagttctgagaaatttccactttcacaaagcctgattctttttggaaaagg 260
Query: 61 tggtttgtcaccactttggtctgcaatatttcttggtgattacttataaaattcatgctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtttgtcaccactttggtctgcaatatttcttggtgattacttataaaattcatgctg 320
Query: 121 tgggaatcccttgtctctctactttcttcttctgttggttttattaatgtctctgtaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggaatcccttgtctctctactttcttcttctgttggttttattaatgtctctgtaaga 380
Query: 181 gttcttactacagaactgtctttggtagcccttactccttaccctgttgtcctggttcat 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 gttcttactacagaactgtctttggtatcccttactccttaccctgttgtcctggttcat 440
Query: 241 tgctatgctccatcttctgctaagaccattggttctcaacctgaggtttgtgtgtggccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctatgctccatcttctgctaagaccattggttctcaacctgaggtttgtgtgtggccc 500
Query: 301 attgtgggggctgaggaaccctttcatagggtttgcctaagaccattggaaaacagataa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attgtgggggctgaggaaccctttcatagggtttgcctaagaccattggaaaacagataa 560
Query: 361 ttacattatgattcataacagtagcaaagttacagttatgaagtaccagcaaaaatacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttacattatgattcataacagtagcaaagttacagttatgaagtaccagcaaaaatacct 620
Query: 421 ttatggttggggccagaactgcctgaggaactgttttaaaggcttgcagctttaggaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttatggttggggccagaactgcctgaggaactgttttaaaggcttgcagctttaggaagg 680
Query: 481 ctgagaacccctgtgttaggcccagtgctgctgtctgcgc-----------tccctattc 529
|||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 681 ctgagaacccctgtgttaggcccagtgctgctgtctgcgcgctgtctgcgctccctattc 740
Query: 530 cttcctcacctctttttttggg 551
||||||||||||||||||||||
Sbjct: 741 cttcctcacctctttttttggg 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
