Query= MSMg01no390_o22.b1 MSMg01no390_o22.b1 CHROMAT_FILE:
MSMg01no390_o22.b1 PHD_FILE: MSMg01no390_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:59 2005
(446 letters)
>mm_chr10_98165594_98166439
Length = 846
Score = 847 bits (438), Expect = 0.0
Identities = 444/446 (99%)
Strand = Plus / Plus
Query: 1 ggcacacctgcttgtcctcttaagtacaaatctatatcagtgactttattattcatatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggcacacctgcttgtcctcttaagtacaaatctatatcagtgactttattattcatatgc 260
Query: 61 tagtaccaagggagcctaggatttgaacatagccaggattttaacctgaatgctactaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtaccaagggagcctaggatttgaacatagccaggattttaacctgaatgctactaat 320
Query: 121 tccttatgtatctagcattagaaacatcataaatcttttgcaattcattgctgggttcta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttatgtatctagcattagaaacatcataaatcttttgcaattcattgctgggttcta 380
Query: 181 tgtggattaattacaatgcatataatagtagctgattatgctttttattacttttttgaa 240
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 tgtggattaattacaatgtatataatagtagctgattatgctttttatcacttttttgaa 440
Query: 241 tccacacaaccaaagggggtcatttttttttctaaaatggcttcctcttaagctgtcagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccacacaaccaaagggggtcatttttttttctaaaatggcttcctcttaagctgtcagc 500
Query: 301 cacctagttcctctcaattcctactttttgagtgggttggagaatgtcactcaaaatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacctagttcctctcaattcctactttttgagtgggttggagaatgtcactcaaaatctc 560
Query: 361 tactattcccggtaaacatgccatgttgctgtcaccatagcacagcttacaatgtatgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tactattcccggtaaacatgccatgttgctgtcaccatagcacagcttacaatgtatgac 620
Query: 421 acccatgttcccatttaaagtcactc 446
||||||||||||||||||||||||||
Sbjct: 621 acccatgttcccatttaaagtcactc 646
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space: 364496
Effective search space used: 364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no390_o22.g1 MSMg01no390_o22.g1 CHROMAT_FILE:
MSMg01no390_o22.g1 PHD_FILE: MSMg01no390_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:34:59 2005
(473 letters)
>mm_chr10_98335033_98335905
Length = 873
Score = 588 bits (304), Expect = e-172
Identities = 349/370 (94%), Gaps = 13/370 (3%)
Strand = Plus / Minus
Query: 1 agcagcacctagcttgcatcaggatgaatgaagactctctctctgcttgtttttctgatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agcagcacctagcttgcatcaggatgaatgaagactctctctctgcttgtttttctgatc 311
Query: 61 tggcaatatggttcctaaattccagataagggctggggagggggacattcagacaaacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tggcaatatggttcctaaattccagataagggctggggagggggacattcagacaaacta 251
Query: 121 taacttctagtctcttccaccattgtgcttaaagttttataaagctagactctctgactc 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 250 taacttctagtctcttccaccattgtgctcaaagttttataaagctagactctctgactc 191
Query: 181 tgtctctgtctctgactctgtctctgtcatctctgtctctgtctttctctg----tctct 236
|||||||| ||||| ||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 190 tgtctctgactctgtctctgtctctgtcatctctgtctctgtctctctctgtctctctct 131
Query: 237 g----tctctg--tctctgtctctgtctctgtctctgtctctctctctctctctctctct 290
| |||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 130 gtctctctctgtctctctctctctgtctctctctctctctctctctctctctctctctct 71
Query: 291 ctctctct---ctctctctctctgtgtgtgtgtgtgtgatatcctatcatcagtcattta 347
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 70 ctctctctctcctctctctctctctgtgtgtgtgtgtgatatcctatcatcagtcattta 11
Query: 348 ctagcctgtg 357
||||||||||
Sbjct: 10 ctagcctgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 89
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
