GGCCGCTATACGACTCCTATAGGTCCAGGATCCGCGGAATTCCATAATTT
TTCTCCCAATCCCCACAAAGAAAAATTGAGTTCCTGAGTGTCATGAGTGT
TTCTTATTCAGTGAGGCACTCGGTGAATTGTGCTGTATACACAGGAGGAA
TTTTATCCATATTTTCTTATTTATATATCGATTCATATAGTTTTAGCGCT
GGGTTTGAGTTTAGGGCTTTGGGCATGCGAGGCAAACACTTCTGAGTTAC
ATCCTCCTTGTCCATGCTACGGGTTATACCCGCAACCCTTCATTCACATC
TTTTTGAGGACATATTGAAAGGTAGCTGACTAACAGCCCAGTTTGCCCGC
GGCGTATCTGCATATTGTTCTATGCTAGGTTGCTGTACTGAAGATCCTTA
GTACTTAATCCTACCACATCTCTGAGCCGTTCCTGATCCCCACCTACAGC
GTAGCAAGTACGCCATGTGCTCCCCCTGTGTTTCCCTGGGGCATATGTTC
CCCTCGCCTGTCCTCCCTGTGGACCGAGTACCCCCATGCCTCCCCCTTTG
NCAGATCTTTACCTGCTCCCCCATGTCCATTTTTGAAAAAACCTCATACC
AGAATGGGTTAGGGAAGCATTTTTTCCCCAACTCCGGTAACGGGCCCCGG
AATGGGCTCAAGGGGTCTGAACTAAGGGGCCAGCCCCCTGGCGGGCCTTT
TTAAAAACCGGCGAAAGGAACCCCCAAACCCCCCCTCCCCCCTTTCTCCC
CCTTCGCAAAAAAAAAAACATGCCCCGCCCC

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACCTGAAGCTGCTTTTTAAAAATGCA
AATGTAATGTTTGCTCAGAATTCCCTAATAGGACACGAAGCTGAATATTA
ACAATAAGATGCTTTTTCTTTGTCTTGTTAGGATTTATCAAATACCAGGT
ACTTTCAACATTAGAATCCCTAAAAGTCAACGTGTATCTCCATAGTGAGA
TTAATGGCTTTAGAGTGTTCTTTCCTTTTCCAGACTACTTTTCCCATACT
TTTCATCAGAGCAATAATCAATTATTATTTGCACAGTAAATATTTTAGAA
TTGATCTGAGTCCCTTTACCAACCCAAATATGAGAAATAATTGCTGGAGC
ATTACTCTAATGTCGATGGCTATTGTTGTTCTTAAGAAGAACAGTGCTCA
GATAACTATCGAGCAGAAGCATAGTCAGTCTGTATTANAAAGTGGAATGA
ATATTAACAGAAAGTCTGCAAGCATTGTTGAAGTGTGTAAAGATAATGAT
ATTGGACATTATGAAACTGAAATTTTAACAGAGCAAATCATGCCCGAAAA
AATTGATTGCTCTTTTTGAAAAAGCTTCCAGATATCCCCATTAAACCCAC
GGCTCGCTGTATATCCCCTCCTCTCCACCCTGGTACAAGGCGTCAATCCT
CCCCCCATTCTCTCTCCCTGCATACTTTACACCGTCCTTGGTGGTCCCCC
CTCCCCCTTCCGTCAACCTCCCCCCACTTTCCCG

Query= MSMg01no391_h24.b1 MSMg01no391_h24.b1 CHROMAT_FILE:
MSMg01no391_h24.b1 PHD_FILE: MSMg01no391_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:44 2005
         (423 letters)



>mm_chr10_91868539_91869361
          Length = 823

 Score =  764 bits (395), Expect = 0.0
 Identities = 407/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 13  caatccccacaaagaaaaattgagttcctgagtgtcatgagtgtttcttattcagtgagg 72
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caatccccacaaagaaaaattgagttcctgagtgtcatgagtgtttcttattcagtgagg 272

                                                                       
Query: 73  cactcggtgaattgtgctgtatacacaggaggaattttatccatattttcttatttatat 132
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 cactcggcgaattgtgctgtatacacaggaggaattttatccatattttcttatttatat 332

                                                                       
Query: 133 atcgattcatatagttttagcgctgggtttgagtttagggctttgggcatgcgaggcaaa 192
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 333 atcgattcatatagttttagcgccgggtttgagtttagggctttgggcatgcgaggcaaa 392

                                                                       
Query: 193 cacttctgagttacatcctccttgtccatgctacgggttatacccgcaacccttcattca 252
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cacttctgagttacatcctccttgtccatgctacgggttatacccgcaacccttcattca 452

                                                                       
Query: 253 catctttttgaggacatattgaaaggtagctgactaacagcccagtttgcccgcggcgta 312
           ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 catctttttgaggacataaagaaaggtagctgactaacagcccagtttgcccgcggcgta 512

                                                                       
Query: 313 tctgcatattgttctatgctaggttgctgtactgaagatccttagtacttaatcctacca 372
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tctgcatattgttctatgctaggttgctgtactgaagatccttagtacttaatcctacca 572

                                                              
Query: 373 catctctgagccgttcctgatccccacctacagcgtagcaagtacgccatg 423
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 catctctgagccgttcctgatccccacctacagcgtagcaagtacgccatg 623


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space:   336996
Effective search space used:   336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no391_h24.g1 MSMg01no391_h24.g1 CHROMAT_FILE:
MSMg01no391_h24.g1 PHD_FILE: MSMg01no391_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:44 2005
         (416 letters)



>mm_chr10_91994912_91995727
          Length = 816

 Score =  760 bits (393), Expect = 0.0
 Identities = 408/413 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acctgaagctgctttttaaaaatgcaaatgtaatgtttgctcagaattccctaataggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 acctgaagctgctttttaaaaatgcaaatgtaatgtttgctcagaattccctaataggac 554

                                                                       
Query: 61  acgaagctgaatattaacaataagatgctttttctttgtcttgttaggatttatcaaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 acgaagctgaatattaacaataagatgctttttctttgtcttgttaggatttatcaaata 494

                                                                       
Query: 121 ccaggtactttcaacattagaatccctaaaagtcaacgtgtatctccatagtgagattaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 ccaggtactttcaacattagaatccctaaaagtcaacgtgtatctccatagtgagattaa 434

                                                                       
Query: 181 tggctttagagtgttctttccttttccagactacttttcccatacttttcatcagagcaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tggctttagagtgttctttccttttccagactacttttcccatacttttcatcagagcaa 374

                                                                       
Query: 241 taatcaattattatttgcacagtaaatattttagaattgatctgagtccctttaccaacc 300
           |||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 taatcaattagtaaatgcacagtaaatattttagaattgatctgagtccctttaccaacc 314

                                                                       
Query: 301 caaatatgagaaataattgctggagcattactctaatgtcgatggctattgttgttctta 360
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 313 caaatatgagaaataattgctggagcattactctaatgtcgatggttattgttgttctta 254

                                                                
Query: 361 agaagaacagtgctcagataactatcgagcagaagcatagtcagtctgtatta 413
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 253 agaagaacagtgctcagataactatcgagcagaagcaaagtcagtctgtatta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 416
Length of database: 816
Length adjustment: 9
Effective length of query: 407
Effective length of database: 807
Effective search space:   328449
Effective search space used:   328449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)