Query= MSMg01no392_l03.b1 MSMg01no392_l03.b1 CHROMAT_FILE:
MSMg01no392_l03.b1 PHD_FILE: MSMg01no392_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:18 2005
(513 letters)
>mm_chr10_100557844_100558756
Length = 913
Score = 963 bits (498), Expect = 0.0
Identities = 507/510 (99%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 4 ggaattcactttgtacaccaggctggccacaaacacaaaaatctgcctgcctctgccccc 63
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ggaattcactttgcagaccaggctggccacaaacacaaaaatctgcctgcctctgccccc 525
Query: 64 caagtgcatggattaaaggcatgagccaccatgcccagctctggtaattttcagtttcac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 caagtgcatggattaaaggcatgagccaccatgcccagctctggtaattttcagtttcac 465
Query: 124 tcatgtcccttgtttccctgtccctggtctgtccagtgcctctctcttcccttgtaatat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcatgtcccttgtttccctgtccctggtctgtccagtgcctctctcttcccttgtaatat 405
Query: 184 aagcaaatctctgttcttaacttttgaaaaaaatttacactaatatgcttttttcaatga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aagcaaatctctgttcttaacttttgaaaaaaatttacactaatatgcttttttcaatga 345
Query: 244 tgattatagaagacgttggatcattgtctctttttttaactttttaaatatttatttaat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 tgattatagaagacgttggatcattgtctctttttttaactttttaaatatttatttaat 285
Query: 304 tttttggctaatatccacatattagtgagcacataccatgcatgcccctttgggtctgag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 tttttggctaatatccacatattagtgagcacataccatgcatgcccctttgggtctgag 225
Query: 364 ttatctcattcaggatgatattttctagttcaatcatttgcctacaaaactcaggatgtt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 ttatctcattcaggatgatattttctagttcaatcatttgcctacaaaactcaggatgtt 165
Query: 424 ctcattcttttttttt-aattttgttttttttattaggtatttattttatttacatttcc 482
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 164 ctcattcttttttttttaattttgttttttttattaggtatttattttatttacatttcc 105
Query: 483 aatgcgatcccaaaagtcccacacacactc 512
||||||||||||||||||||||||||||||
Sbjct: 104 aatgcgatcccaaaagtcccacacacactc 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_l03.g1 MSMg01no392_l03.g1 CHROMAT_FILE:
MSMg01no392_l03.g1 PHD_FILE: MSMg01no392_l03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:18 2005
(258 letters)
>mm_chr10_100382531_100383190
Length = 660
Score = 466 bits (241), Expect = e-136
Identities = 254/259 (98%), Gaps = 2/259 (0%)
Strand = Plus / Plus
Query: 1 acctaggcacactgctacctggtccctgctcacctcagtgttggcatcgtgttgactaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acctaggcacactgctacctggtccctgctcacctcagtgttggcatcgtgttgactaat 260
Query: 61 gtgaagttttctatgagagtcaaacttcatcttcttcctaactggggacatatctccaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgaagttttctatgagagtcaaacttcatcttcttcctaactggggacatatctccaca 320
Query: 121 aatttcttcatacacgcttaagtcagttaataacttctattattaatagttatgttaatt 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 aatttcttcatacacgcttaagtcagttaataacttctattatcaatagttatgttaatt 380
Query: 181 ttgtcattggtgctaaagcttttgcccttttttttt--ggttgttttttcttttttgttg 238
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ttgtcattggtgctaaagcttttgccctttttttttttggttgttttttcttttttgttg 440
Query: 239 ctgctttggttttttgttt 257
|| |||||||||||||||
Sbjct: 441 ttgttttggttttttgttt 459
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 660
Length adjustment: 9
Effective length of query: 249
Effective length of database: 651
Effective search space: 162099
Effective search space used: 162099
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
