Query= MSMg01no392_l19.b1 MSMg01no392_l19.b1 CHROMAT_FILE:
MSMg01no392_l19.b1 PHD_FILE: MSMg01no392_l19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:22 2005
(365 letters)
>mm_chr10_43601103_43601869
Length = 767
Score = 656 bits (339), Expect = 0.0
Identities = 357/363 (98%), Gaps = 2/363 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcctctc-ccacatcattgaagccttcctgtctggttgcggcgtacatggctt 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcctctcaccacatcattgaagccttcctgtctggttgcggcgtacatggctt 264
Query: 64 cagtggacacatcaacaccagacctatgacctgagcagaggcaaacatcactcgagaaag 123
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 cagtggacacatcaacaccagacctatgacctaagcagaggcaaacatcactcgagaaag 324
Query: 124 aagtcaaggctcagctgtgaaacagtactgtggacaatacggatcttggagagctttcct 183
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 aagtcaaggctcagctgtgaaacagtactgtggacaatacagatcttggagagctttcct 384
Query: 184 gtctaagttctgcatttgctctgtgcctgactgaccacttagtaatgaggactggccatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtctaagttctgcatttgctctgtgcctgactgaccacttagtaatgaggactggccatg 444
Query: 244 gagagaaaagcatagccatg-aagaactttatgttgttcttccgtccacccgtccgtcca 302
|||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 gagagaaaagcaaagccatggaagaactttatgttgttcttccgtccatccgtccgtcca 504
Query: 303 tgcatgtgtgcatccatgcattcatccatccatacacactttgattgcgctccaccttgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgcatgtgtgcatccatgcattcatccatccatacacactttgattgcgctccaccttgt 564
Query: 363 cag 365
|||
Sbjct: 565 cag 567
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 767
Length adjustment: 9
Effective length of query: 356
Effective length of database: 758
Effective search space: 269848
Effective search space used: 269848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no392_l19.g1 MSMg01no392_l19.g1 CHROMAT_FILE:
MSMg01no392_l19.g1 PHD_FILE: MSMg01no392_l19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:37:22 2005
(252 letters)
>mm_chr10_43769581_43770232
Length = 652
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%)
Strand = Plus / Minus
Query: 1 ctcactctagagagcgcactccctgcacaagggcgtcgatctgtattattgaagatggtc 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 452 ctcactctagagagcgcactccctgcacgagggcgtcgatctgtattattgaagatggtc 393
Query: 61 aaatgggaagaccacagagttgggagtaactccaaaacaggttgtactcgaagtctattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaatgggaagaccacagagttgggagtaactccaaaacaggttgtactcgaagtctattt 333
Query: 121 tggctccagcctagtggttgtctgtatgaaaggagactgctttctgcttggtgtagtggg 180
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct: 332 tggctccagcctagtggttgtctgcatgaaaggagactggtttctgcttggtgtagtggg 273
Query: 181 agccagagtagcgggattatggcagcaatagggaggtggcttgcctcagtaaagagcagg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agccagagaagcgggattatggcagcaatagggaggtggcttgcctcagtaaagagcagg 213
Query: 241 gacctgctgtgt 252
||||||||||||
Sbjct: 212 gacctgctgtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
