Query= MSMg01no394_f14.b1 MSMg01no394_f14.b1 CHROMAT_FILE:
MSMg01no394_f14.b1 PHD_FILE: MSMg01no394_f14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:42 2005
(325 letters)
>mm_chr10_107369567_107370291
Length = 725
Score = 567 bits (293), Expect = e-166
Identities = 314/321 (97%), Gaps = 1/321 (0%)
Strand = Plus / Plus
Query: 1 agtcttggtttctcactgagctctaccatagcaaggcaaatgtgctctgtgtcacaggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcttggtttctcactgagctctaccatagcaaggcaaatgtgctctgtgtcacaggtg 260
Query: 61 atatagaaaggaggagaacacagatccagatatacaaaaataagggaagaacagcacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atatagaaaggaggagaacacagatccagatatacaaaaataagggaagaacagcacact 320
Query: 121 tggaacagcagttaggataaccctgtttgtgagctgtgaagacatttcagtgcaatgagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggaacagcagttaggataaccctgtttgtgagctgtgaagacatttcagtgcaatgaga 380
Query: 181 atgattgtcaggcggtttttcttggtttgaaacataatgaaaaagcactcaaagctttat 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 atgattgtcaggtggtttttcttggtttgaaacataatgaaaaagcactcaaagctctat 440
Query: 241 aatattttttaataatgagtgtactgtgtatgtgtgtgcatatgcacatgtatgtatata 300
||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 441 aatattttt-aatattgagtgtactgtgtctgtgtgtgcatatgcacatgtatgcatata 499
Query: 301 ccaagcctgggtgtggaggtc 321
|||||||||||||||||||||
Sbjct: 500 ccaagcctgggtgtggaggtc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 725
Length adjustment: 9
Effective length of query: 316
Effective length of database: 716
Effective search space: 226256
Effective search space used: 226256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_f14.g1 MSMg01no394_f14.g1 CHROMAT_FILE:
MSMg01no394_f14.g1 PHD_FILE: MSMg01no394_f14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:42 2005
(336 letters)
>mm_chr10_107583375_107584110
Length = 736
Score = 615 bits (318), Expect = e-180
Identities = 329/334 (98%), Gaps = 3/334 (0%)
Strand = Plus / Minus
Query: 6 aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaaagaaagattatttaaat 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 aaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaaagaaagattatttaaat 550
Query: 66 taaaaaaaa---agagaaatgagaacttttagtgtcccttaaagagcgggagttctgagt 122
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 taaaaaaaaaacagagaaatgagaacttttagtgtcccttaaagagcgggagttctgagt 490
Query: 123 gctttgcccacgtttacagcctccgctgtaacacctgcaaaagctcctctctgatctgct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gctttgcccacgtttacagcctccgctgtaacacctgcaaaagctcctctctgatctgct 430
Query: 183 ttatttcactgtcactcagaccatctgtgccactgcagtgggctttggcgatcacagttt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 ttatttcactgtcactcagaccatctgtgccactgcagtgggctttggcgatcacagttt 370
Query: 243 tggttttagccatttaagatgccttagcaggagagttgtatcacccaatatctgcttcaa 302
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 369 tgattttagccatttaagatgccttagcaggagagttctatcacccaatatctgcttcaa 310
Query: 303 aaagatccctttggaagaaaaatagaggctaaat 336
||||||||||||||||||||||||||||||||||
Sbjct: 309 aaagatccctttggaagaaaaatagaggctaaat 276
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 336
Length of database: 736
Length adjustment: 9
Effective length of query: 327
Effective length of database: 727
Effective search space: 237729
Effective search space used: 237729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
