Query= MSMg01no394_h24.b1 MSMg01no394_h24.b1 CHROMAT_FILE:
MSMg01no394_h24.b1 PHD_FILE: MSMg01no394_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:54 2005
(418 letters)
>mm_chr10_9386637_9387455
Length = 819
Score = 671 bits (347), Expect = 0.0
Identities = 377/387 (97%), Gaps = 1/387 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaagctctgcctatgcaatggcctcctggcaccaatggtagggggatttggta 64
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 387 gaattcagaagctctgtctatgcaatggcctcctgacaccaatggtagggggatttggta 328
Query: 65 atacccatttatgtggtactaaacccatggtagaattttcacctccatcactaatcaatt 124
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct: 327 atacccatttatgtggtactaaacccatggtagaatttttacctccatctctaatcaatt 268
Query: 125 ccacgtggtaagattagaatg-aaatcatttcttaaaaatacaactgttcaaaattgggt 183
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ccacatggtaagattagaatgaaaatcatttcttaaaaatacaactgttcaaaattgggt 208
Query: 184 tattgtcgtggtttgtatattcttggaccagggagtggcaccatttggaggtgtggcctt 243
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tattgtcatggtttgtatattcttggaccagggagtggcaccatttggaggtgtggcctt 148
Query: 244 gttggaataggtatggcctggttggagtaggtgtgtcactgtgggtgtgggcttaagacc 303
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gttggaataggtgtgacctggttggagtaggtgtgtcactgtgggtgtgggcttaagacc 88
Query: 304 ctcaccctagttgcctggaagtcagtcttccactagcagctttcagatgaagatgtacag 363
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 ctcaccctagttgcttggaagtcagtcttccactagcagctttcagatgaagatgtacag 28
Query: 364 ctctcagctctgcctgtgccctgcctg 390
|||||||||||||||||||||||||||
Sbjct: 27 ctctcagctctgcctgtgccctgcctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_h24.g1 MSMg01no394_h24.g1 CHROMAT_FILE:
MSMg01no394_h24.g1 PHD_FILE: MSMg01no394_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:54 2005
(400 letters)
>mm_chr10_9353065_9353864
Length = 800
Score = 750 bits (388), Expect = 0.0
Identities = 397/400 (99%)
Strand = Plus / Plus
Query: 1 tccctacacacttatcattcataaaactctcagaaacacactgaggttaaaaaagcaaaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctacacacttattattcataaaactctcagaaacacactgaggttaaaaaagcaaaa 260
Query: 61 acatctttgtctatgttatcctcggggcattaactgatgttataatttttccaactgaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acatctttgtctatgttatcctcggggcattaactgatgttataatttttccaactgaac 320
Query: 121 agttatgtaaattcacaacttaaaaagctgctctgcagacctcagcactgagcactcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttatgtaaattcacaacttaaaaagctgctctgcagacctcagcactgagcactcttc 380
Query: 181 tatgagaggacttcccacacacagaaccacccgaaggcctgtggtcagccagggacagcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatgagaggacttcccacacacagaaccacccgaaggcctgtggtcagccagggacagcc 440
Query: 241 agtactgcaggagcttctaggggcctggagtcagagcctcagctagctcctccatcagta 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 agtactgcaggagcttctaggggcctggagtcagagcctcagctaggtcctccatcagta 500
Query: 301 acaaaggctcaggaatgcaactgcggggaattcagcatgaagctttctgttgatctgcaa 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaaggctcaggaatgcaactgcggggaattcagcatgaagctttctgttgatctgcag 560
Query: 361 taattaacagccagtcagaacaggaacccaaggctaggtc 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taattaacagccagtcagaacaggaacccaaggctaggtc 600
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space: 309281
Effective search space used: 309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
