GGGCCGCTATACGACTCACTATTTTCAGAGGATCCGCGGAATTCAAATCG
AGTGATTTCTTTGCTTGGGAGTGTGGGGTGGGTAATAAGTTATGTCTGAA
TTCATCCAGAAGTATTAAAAAATATTAAAATGTTACACCTTTAAAACTGT
AAAAAAATGGATTTATATTTCTAAAATATTGAAACAACATTCCATTCTGT
GAATACAAGTATGTCGTTTGTCTTTTATTGACAGCTGAGGTTGCTTGGTA
AAGTAGTCAGTTGTGCAAACCGTGCAACGTCTCCCTGGTTCTTCAAGTGA
TAAGAAGGACATACTCTCCCTGAAGCTCTTTAACTACAATTTTCTCTACA
TCTGGTCCTAAGAGAAATTAAGCAAGCCAAACTGGCATATCCTAACTGAT
AATGTGCTTTCACTCTTCTCTAAATTAGTATGCTACGTTTATGACCAGCC
TGATAAATGAGCCTACCTCAAAAGATATGTTTTTACTTATAAAAATATTT
AAATTATTGCACTTGGTATTCTATTGTTTCTTAAAAATAAAAAAGAGAAA
GTAAATATTAAAGAGTAAGCAACTGATCAAGTAGNTTACAATGTGTTCAA
ATTAAAGGAATAAAAATAAATGCATATTGTGTATACAACTATTCCTAAAT
GCATTANAACTATAAAAAATATTAGAAGCCTGAAAATTANAAGCATGGGA
AATTTTCTTTACTCTAAAATATCACGCCAAAAGTGGTTTCCCTTAACCCC
GAN

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCTACACTGGGGTGGTCTATAAGCATGTCTAGGGGA
GATGCTTTTTGTTAATTGATATGGAAAGACTATGTCCACAGAGGGTGGCA
TCATTTCCTAGGCAAGCGGTCCTGAGTTTTGTAAGAGAAAGCAATCAGGT
CTGCATGCACTCATTTCTCTCTGCTCCTAACAGTTGTAAGTTACTTCTCC
ACTAGGATGCAGTCTGGTGTTTTAGGCCAAATGAACCTGTTTCTACTAAA
TTGCTAACTATTTGGGGATTTTATCCCAGCACCAGAAGTGAAAGTAGACC
ACCAGCTAAAACTGAGTCCCACATCACAGTTGCTACAAGGGAAATGGAAA
GCAAAGTGTCATTACAGAGAGGAAACTACCATAGAAAAAGAGTGGTCTAT
ACCAAAGAACACTGGGTCCCTATCTGACAGTAATCGTTTTAATAAAATGA
TTTATTTATTTCTATTTTATGTGCATTAGTGTTTTGCCCTGGAACTGGAA
TTACAGCTAGTTGTGAGCTGCCTGGGAATTGAACCCAGGCCCTCTGGAAG
AGCAGCCAGTGCTCTTTAACCACTGAGCCATCTCTCCAGCATCACCACCC
CCAACATTCAAAAAAGAAATTTTTGCTTTTCAGAAATCATTCCTTGTCAA
TTGATTGCCAACAAAATTCTACTAGCAAAGGANGTAAAAAGATG

Query= MSMg01no396_c13.b1 MSMg01no396_c13.b1 CHROMAT_FILE:
MSMg01no396_c13.b1 PHD_FILE: MSMg01no396_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:13 2005
         (547 letters)



>mm_chr10_109160139_109161085
          Length = 947

 Score = 1017 bits (526), Expect = 0.0
 Identities = 538/542 (99%)
 Strand = Plus / Minus

                                                                       
Query: 6   ggaattcaaatcgagtgatttctttgcttgggagtgtggggtgggtaataagttatgtct 65
           ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 654 ggaattcaaatcgagggatttctttgcttgggagcgtggggtgggtaataagttatgtct 595

                                                                       
Query: 66  gaattcatccagaagtattaaaaaatattaaaatgttacacctttaaaactgtaaaaaaa 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 gaattcatccagaagtattaaaaaatattaaaatgttacacctttaaaactgtaaaaaaa 535

                                                                       
Query: 126 tggatttatatttctaaaatattgaaacaacattccattctgtgaatacaagtatgtcgt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tggatttatatttctaaaatattgaaacaacattccattctgtgaatacaagtatgtcgt 475

                                                                       
Query: 186 ttgtcttttattgacagctgaggttgcttggtaaagtagtcagttgtgcaaaccgtgcaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ttgtcttttattgacagctgaggttgcttggtaaagtagtcagttgtgcaaaccgtgcaa 415

                                                                       
Query: 246 cgtctccctggttcttcaagtgataagaaggacatactctccctgaagctctttaactac 305
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 414 cgtctccctggttcttcaagtgataagaaggacatactctccctgaaactctttaactac 355

                                                                       
Query: 306 aattttctctacatctggtcctaagagaaattaagcaagccaaactggcatatcctaact 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aattttctctacatctggtcctaagagaaattaagcaagccaaactggcatatcctaact 295

                                                                       
Query: 366 gataatgtgctttcactcttctctaaattagtatgctacgtttatgaccagcctgataaa 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gataatgtgctttcactcttctctaaattagtatgctacgtttatgaccagcctgataaa 235

                                                                       
Query: 426 tgagcctacctcaaaagatatgtttttacttataaaaatatttaaattattgcacttggt 485
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 234 tgagcctacctcaaaagatatgtctttacttataaaaatatttaaattattgcacttggt 175

                                                                       
Query: 486 attctattgtttcttaaaaataaaaaagagaaagtaaatattaaagagtaagcaactgat 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 attctattgtttcttaaaaataaaaaagagaaagtaaatattaaagagtaagcaactgat 115

             
Query: 546 ca 547
           ||
Sbjct: 114 ca 113


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)