Query= MSMg01no396_g06.b1 MSMg01no396_g06.b1 CHROMAT_FILE:
MSMg01no396_g06.b1 PHD_FILE: MSMg01no396_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:30 2005
(246 letters)
>mm_chr10_82529479_82530124
Length = 646
Score = 449 bits (232), Expect = e-131
Identities = 241/244 (98%)
Strand = Plus / Minus
Query: 1 taactgagctactcatacttgcaccactagtaatataattaccaagccatcgctcccatg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 444 taactgagctactcatacttgcaccacaagtaatataattaccaagccatcgctcccatg 385
Query: 61 ctcgcctgggtattagaataaaaacgagacttcttcacttcccccatgatggaaaatagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcgcctgggtattagaataaaaacgagacttcttcacttcccccatgatggaaaatagg 325
Query: 121 tcaaataacccaggtctggctagtgagatataagcataaccattcttgctgtagtaaagg 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 324 tcaaataacccaggtctggctaatgagatataagcataaccattcttgctgtaataaagg 265
Query: 181 actgtcccagactacaaagagaggggacagagagaggcagagtgcctgagccgctggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgtcccagactacaaagagaggggacagagagaggcagagtgcctgagccgctggcat 205
Query: 241 catg 244
||||
Sbjct: 204 catg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_g06.g1 MSMg01no396_g06.g1 CHROMAT_FILE:
MSMg01no396_g06.g1 PHD_FILE: MSMg01no396_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:30 2005
(243 letters)
>mm_chr10_82374494_82375136
Length = 643
Score = 373 bits (193), Expect = e-108
Identities = 228/243 (93%), Gaps = 7/243 (2%)
Strand = Plus / Plus
Query: 1 ctgcctgtatgccagagaaggctctcaggatgagcccgtaggaaatgcagtcgaagttta 60
||||||||| | |||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 208 ctgcctgtacggcagagaaggctctcaggatgagcccgtaggaaatgc--t-----ttta 260
Query: 61 ttacgaagagatttcaacagaggcttgggcacaggggttactagaaagagaggcactcgg 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttacggagagatttcaacagaggcttgggcacaggggttactagaaagagaggcactcgg 320
Query: 121 agacagcacgagacacatgtaagggtgagtgcgggtttcccaggaaagccacacccatgt 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 321 agacagcacgagacacaggtaagggtgagtgcgggtttcccaggaaagccacatccaagt 380
Query: 181 gtttttgcagtggctgtatccaggtatcttatgctgtcaaggtccagggggcacacacag 240
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 381 gtttttgcagtggctgtatccaggtatcttacgctgtcaaggtccagggtgcacacacag 440
Query: 241 aac 243
|||
Sbjct: 441 aac 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
