MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-396I22
Chromosome	10 (Build37)
Map Location	118,047,360 - 118,047,607
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cpm, Mdm2, Slc35e3, Nup107, Rap1b, Mdm1, Il22, LOC672934, LOC668180, LOC668186, LOC668187, LOC668191, EG668193, Iltifb, LOC668198, EG668203, EG668205, EG668209, EG668213, LOC668216, Ifng
Downstream gene	LOC100043478, LOC100042850, Dyrk2, LOC668223, LOC100042861, LOC674417, Cand1, Grip1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cpm (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70574 MGI:1917824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 121 ESTs, 20 Proteins

name	Mdm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17246 MGI:96952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc35e3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215436 MGI:2448489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nup107 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:103468 MGI:2143854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rap1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215449 MGI:894315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mdm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17245 MGI:96951
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Il22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50929 MGI:1355307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672934 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672934
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	LOC668180 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 175 ESTs, 9 Proteins pseudo : _no_value

name	LOC668186 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 353 ESTs, 4 Proteins

name	LOC668187 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 354 ESTs, 4 Proteins

name	LOC668191 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 182 ESTs, 9 Proteins pseudo : _no_value

name	EG668193 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668193 MGI:3643527
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 Proteins pseudo : _no_value

name	Iltifb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:116849 MGI:2151139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668198 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 304 ESTs, 8 Proteins pseudo : _no_value

name	EG668203 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668203 MGI:3647148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 336 ESTs, 8 Proteins pseudo : _no_value

name	EG668205 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668205 MGI:3647146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 335 ESTs, 8 Proteins pseudo : _no_value

name	EG668209 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668209 MGI:3647143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 326 ESTs, 8 Proteins pseudo : _no_value

name	EG668213 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668213 MGI:3644213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 326 ESTs, 8 Proteins pseudo : _no_value

name	LOC668216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 291 ESTs, 8 Proteins pseudo : _no_value

name	Ifng (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15978 MGI:107656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043478 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042850 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Dyrk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69181 MGI:1330301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668223 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668223
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 15 Proteins pseudo : _no_value

name	LOC100042861 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042861
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC674417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Cand1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71902 MGI:1261820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 278 ESTs, 8 Proteins

name	Grip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74053 MGI:1921303
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Cpm (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94388683 GeneID:70574 MGI:1917824
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 121 ESTs, 20 Proteins product : carboxypeptidase M transcript_id : XM_994613.1

name	Mdm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801983 GeneID:17246 MGI:96952
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 2 transcript_id : NM_010786.3

name	Slc35e3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37497123 GeneID:215436 MGI:2448489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 35, member E3 transcript_id : NM_029875.2

name	Nup107 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371216 GeneID:103468 MGI:2143854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleoporin 107 transcript_id : NM_134010.2

name	Rap1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117676385 GeneID:215449 MGI:894315
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAS related protein 1b transcript_id : NM_024457.2

name	Mdm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27229284 GeneID:17245 MGI:96951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 1 transcript_id : NM_148922.2

name	Mdm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754669 GeneID:17245 MGI:96951
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transformed mouse 3T3 cell double minute 1 transcript_id : NM_010785.1

name	Il22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8393604 GeneID:50929 MGI:1355307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 22 transcript_id : NM_016971.1

name	LOC668186 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261189 GeneID:668186
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 353 ESTs, 4 Proteins product : similar to Cell division cycle 5-like (S. pombe) transcript_id : XM_001480718.1

name	LOC668187 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261191 GeneID:668187
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 354 ESTs, 4 Proteins product : similar to Cell division cycle 5-like (S. pombe) transcript_id : XM_001480720.1

name	Iltifb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21426818 GeneID:116849 MGI:2151139
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 10-related T cell-derived inducible factor beta transcript_id : NM_054079.1

name	Ifng (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227243 GeneID:15978 MGI:107656
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interferon gamma transcript_id : NM_008337.2

name	LOC100043478 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261193 GeneID:100043478
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043478 transcript_id : XM_001480723.1

name	LOC100042850 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261077 GeneID:100042850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042850 transcript_id : XM_001478929.1

name	Dyrk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131133 GeneID:69181 MGI:1330301
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 transcript_id : NM_001014390.2

name	LOC100042861 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261079 GeneID:100042861
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042861 transcript_id : XM_001478942.1

name	LOC674417 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149261081 GeneID:674417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to Ubtf protein transcript_id : XM_001478954.1

name	Cand1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149261083 GeneID:71902 MGI:1261820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 278 ESTs, 8 Proteins product : cullin associated and neddylation disassociated 1, transcript variant 1 transcript_id : XM_125901.8

name	Grip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:41281632 GeneID:74053 MGI:1921303
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor interacting protein 1 transcript_id : NM_133442.1

name	Cpm (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94388684 GeneID:70574 MGI:1917824
definition	codon_start : 1 product : carboxypeptidase M protein_id : XP_999707.1

name	Mdm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754672 CCDS:CCDS24194.1 GeneID:17246 MGI:96952
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005730 - nucleolus [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030163 - protein catabolism [Evidence IDA]; GO:0016567 - protein ubiquitination [Evidence IDA]; GO:0007089 - traversing start control point of mitotic cell cycle [Evidence IDA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : transformed mouse 3T3 cell double minute 2 protein_id : NP_034916.1

name	Slc35e3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37497124 CCDS:CCDS24195.1 GeneID:215436 MGI:2448489
definition	codon_start : 1 product : solute carrier family 35, member E3 protein_id : NP_084151.2

name	Nup107 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29789351 GeneID:103468 MGI:2143854
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005643 - nuclear pore [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0019867 - outer membrane [Evidence IEA] GO_function : GO:0015288 - porin activity [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : nucleoporin 107 protein_id : NP_598771.1

name	Rap1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859753 CCDS:CCDS24196.1 GeneID:215449 MGI:894315
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0008170 - N-methyltransferase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008283 - cell proliferation [Evidence IPI]; GO:0006306 - DNA methylation [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IDA] [Evidence IEA] codon_start : 1 product : RAS related protein 1b protein_id : NP_077777.1

name	Mdm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22507389 GeneID:17245 MGI:96951
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2 product : transformed mouse 3T3 cell double minute 1 isoform 2 protein_id : NP_683724.1

name	Mdm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754670 GeneID:17245 MGI:96951
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : transformed mouse 3T3 cell double minute 1 isoform 1 protein_id : NP_034915.1

name	Il22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393605 GeneID:50929 MGI:1355307
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006955 - immune response [Evidence IEA]; GO:0006800 - oxygen and reactive oxygen species metabolism [Evidence IDA]; GO:0042516 - regulation of tyrosine phosphorylation of Stat3 protein [Evidence IDA] codon_start : 1 function : cytokine note : interleukin 10-related T cell-derived inducible factor product : interleukin 22 protein_id : NP_058667.1

name	LOC668186 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261190 GeneID:668186
definition	codon_start : 1 product : similar to Cell division cycle 5-like (S. pombe) protein_id : XP_001480768.1

name	LOC668187 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261192 GeneID:668187
definition	codon_start : 1 product : similar to Cell division cycle 5-like (S. pombe) protein_id : XP_001480770.1

name	Iltifb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21426819 GeneID:116849 MGI:2151139
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005125 - cytokine activity [Evidence IEA] GO_process : GO:0006955 - immune response [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy function : cytokine product : interleukin 10-related T cell-derived inducible factor beta protein_id : NP_473420.1

name	Ifng (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468859 CCDS:CCDS24200.1 GeneID:15978 MGI:107656
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005615 - extracellular space [Evidence IDA] GO_function : GO:0005125 - cytokine activity [Evidence IDA]; GO:0005133 - interferon-gamma receptor binding [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0019882 - antigen processing and presentation [Evidence IDA]; GO:0042742 - defense response to bacterium [Evidence IDA]; GO:0006955 - immune response [Evidence IEA]; GO:0006925 - inflammatory cell apoptosis [Evidence IMP]; GO:0031642 - negative regulation of myelination [Evidence IDA]; GO:0001781 - neutrophil apoptosis [Evidence IMP]; GO:0030593 - neutrophil chemotaxis [Evidence IMP] [Evidence IDA]; GO:0045080 - positive regulation of chemokine biosynthesis [Evidence IDA] [Evidence IMP]; GO:0050718 - positive regulation of interleukin-1 beta secretion [Evidence IMP]; GO:0045084 - positive regulation of interleukin-12 biosynthesis [Evidence IDA]; GO:0045410 - positive regulation of interleukin-6 biosynthesis [Evidence IMP] [Evidence IDA]; GO:0048304 - positive regulation of isotype switching to IgG isotypes [Evidence IDA]; GO:0045348 - positive regulation of MHC class II biosynthesis [Evidence IDA]; GO:0045893 - positive regulation of transcription, DNA-dependent [Evidence IDA]; GO:0001558 - regulation of cell growth [Evidence IEA]; GO:0050776 - regulation of immune response [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IDA]; GO:0009615 - response to virus [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA] codon_start : 1 product : interferon gamma protein_id : NP_032363.1

name	LOC100043478 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261194 GeneID:100043478
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480773.1

name	LOC100042850 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261078 GeneID:100042850
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478979.1

name	Dyrk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:67846105 CCDS:CCDS24201.1 GeneID:69181 MGI:1330301
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018108 - peptidyl-tyrosine phosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 2 protein_id : NP_001014412.1

name	LOC100042861 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261080 GeneID:100042861
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478992.1

name	LOC674417 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149261082 GeneID:674417
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479004.1

name	Cand1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149261084 GeneID:71902 MGI:1261820
definition	codon_start : 1 product : TBP-interacting protein isoform 1 protein_id : XP_125901.8

name	Grip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:41281633 GeneID:74053 MGI:1921303
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0045121 - lipid raft [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0008104 - protein localization [Evidence IMP] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; eye blebs product : glutamate receptor interacting protein 1 isoform 3 protein_id : NP_597699.1

name	LOC672934 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672934
definition	number : 2 pseudo : _no_value

name	LOC672934 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:672934
definition	number : 1 pseudo : _no_value

name	EG668193 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668193
definition	number : 1 pseudo : _no_value

name	EG668193 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668193
definition	number : 2 pseudo : _no_value

name	LOC668223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668223
definition	number : 1 pseudo : _no_value

name	LOC668223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668223
definition	number : 2 pseudo : _no_value

name	LOC668223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668223
definition	number : 3 pseudo : _no_value

name	LOC668223 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668223
definition	number : 4 pseudo : _no_value

name	LOC668180 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261067 GeneID:668180
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 175 ESTs, 9 Proteins product : similar to mKIAA0432 protein pseudo : _no_value transcript_id : XR_033936.1

name	LOC668191 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261068 GeneID:668191
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 182 ESTs, 9 Proteins product : similar to mKIAA0432 protein pseudo : _no_value transcript_id : XR_033939.1

name	LOC668198 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261070 GeneID:668198
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 304 ESTs, 8 Proteins product : hypothetical LOC668198 pseudo : _no_value transcript_id : XR_033955.1

name	EG668203 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261071 GeneID:668203 MGI:3647148
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 336 ESTs, 8 Proteins product : predicted gene, EG668203 pseudo : _no_value transcript_id : XR_033963.1

name	EG668205 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94388692 GeneID:668205 MGI:3647146
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 335 ESTs, 8 Proteins product : predicted gene, EG668205 pseudo : _no_value transcript_id : XR_002156.1

name	EG668209 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261072 GeneID:668209 MGI:3647143
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 326 ESTs, 8 Proteins product : predicted gene, EG668209 pseudo : _no_value transcript_id : XR_033974.1

name	EG668213 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149261073 GeneID:668213 MGI:3644213
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 326 ESTs, 8 Proteins product : predicted gene, EG668213 pseudo : _no_value transcript_id : XR_033979.1

name	LOC668216 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149261074 GeneID:668216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 291 ESTs, 8 Proteins product : similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) pseudo : _no_value transcript_id : XR_033983.1

clone name	MSMg01-207L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105M15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-367P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179B24
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-201J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465A21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-288B12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-387O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-159J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374F04
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-396I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120G06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064C07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-193O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-525E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124F09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-322F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262L23
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-396I22.T7 (MSMg01no396_i22.b1)	MSMg01-396I22.TJ (MSMg01no396_i22.g1)
ACC	AG497106	AG497107
length	789	758
length of high quality (start - end)	118 (36 - 153)	250 (66 - 315)
definition	CHROMAT_FILE: MSMg01no396_i22.b1 PHD_FILE: MSMg01no396_i22.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:08:43 2005	CHROMAT_FILE: MSMg01no396_i22.g1 PHD_FILE: MSMg01no396_i22.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:08:43 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCGCTT TTCTTCTGATTCCCTTCTCTCTCTCTCTTTCTCCCTCTCTCTCTCTCTCC CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGAATAGGAGTCGGATCCTG ACACAGTAGTCCACACTATAAAAATATGAAATACAGATTCATATTTTTAT TTATAACTGTATTAGATTAAAAGGAAGAATCCTACTGGACTGGTCTTGGT AGAGCGAGAAGGCGGCTGGCTGAGCAGGCTATCAAGACTTGAGTATACAA GTGTGGAGGCCGAGAATGAAGCCAGCACTTCCACTATTTGTGATGAAACT TTCCTGACACTCTGTATCTTAACAGCTCAGGGTTTTGATTTCTCTGGCAG TGGTGCTTTCTCTTCCTCTGAGCACAGAGATTCTCTCCAGCGCTTTAGAT GTCTGAGACAGAAGATAGACTCTGCCTGTGTTGGCTCATGTTGAAATAGG AGGCAGGTGAGGCTCTTTCACACCCACAAAAGTTGAGGCTATGCTTGAAA ATTAAAACACCATTCCCCCTGGGGCCAATTGTCCTCCAAAAAAATGGGAA GGGTTTCCCTAAAAACCCCAACTCGAAAGGTAAAGGCGGGTGGCCCTCCC TGGAATTATTTCTGGGTTCCCCCCCCGCCTGGGGTTGGAGAAACACAACT TTTTGTTATAAACACCGCCCTTGAGATTGAAAATTATAGGCTCTGGTAAA GAGCCCCCTAACAAAAGGTCGGTGGGGTGTTCGTGGAAA	XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXAGGTATAAATGAGGGATACAGCGGGGAGCTCACAA ACGTCTCTGAAATGGGAAACTGTGGTTCAAATCATTCCACGGTTGGTGCT GAACCTTCCCATGGTGATCATATGCCAAAATGTCCCCTGTCAGGGCTGAC TGATAACCTCAAAGATCCTGGAATGGCCTACTGGGTTTAATCTGGCTTTT GCCAACAATGAGTGCGCTCTGGCAGAGGCATGTGCAGACGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGNNNNNNNNNNNNNTNNNNNNNNNNNN NTTTTTTTTTTTTTTNNNTTTTTTTTTTTTTTTNTTTTTTTTTTTNTTTT TNCCCCCCCCCCTCCTTTCCTCTCTTCCCTTTTTCTTCTCTTTTCTTTTT CTTTTTTTCTCTCTCTTCTCCTTTCTCTCTCCCCTTTTTCTTCCTCTTTT TTTCCTTCTCTCTTTTTCTCTCTTTTTCTCCTTCCTTCTTCCCCTCTCTT TCTCCTCTCTTTCTTTTTTTTCCTCCTTTCTTCTTTCCTTTCTTTTCCTC CTTTTTCTTTCCTCTTCTTCCTTTTCTTCTTTTTCTTTTTTCCCCCTCTT TTTTCTTTTTCTTTCCCCCTTTTTTCCCCTTTTTTCCTTTCCTTTTTTCT TTNTCCCCTCTTTTCCCCCCCCTCCTTCCCCTCCCTCTCCTTTTCCTTTT TTCTTCTN
quality values	Open. Hide. 21 25 25 25 11 11 11 17 12 10 13 15 19 32 32 27 21 10 9 9 22 21 21 10 10 9 13 9 11 11 10 13 11 18 21 23 34 36 47 33 33 33 33 36 33 59 59 59 59 34 22 12 10 8 8 8 10 13 13 19 26 33 46 46 48 48 50 50 57 59 59 59 59 59 59 59 59 59 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 44 44 33 33 33 24 19 19 23 23 32 36 24 24 23 23 28 43 43 43 43 30 38 15 15 14 12 11 11 11 11 17 15 24 24 24 24 27 27 23 32 41 21 28 18 14 14 16 28 36 50 50 50 32 32 24 24 19 23 44 44 37 37 35 37 37 43 44 35 32 33 44 44 59 38 38 14 13 13 19 19 15 13 13 13 24 21 27 20 20 27 32 43 35 44 35 35 32 32 36 36 19 32 24 26 32 42 42 36 28 18 18 14 15 15 18 18 23 28 24 28 24 15 12 12 12 12 12 12 32 32 18 17 12 12 11 11 12 16 18 18 18 13 12 15 20 15 15 12 15 15 12 12 15 24 21 25 15 15 14 15 15 22 23 24 15 12 12 11 11 11 11 15 12 13 13 13 13 15 15 20 24 24 13 13 24 18 10 8 8 8 8 12 13 17 14 15 14 14 14 28 18 28 32 39 28 27 14 14 14 19 19 28 20 20 20 23 23 19 13 13 15 15 20 28 28 30 33 28 21 18 13 12 12 15 13 12 11 17 18 28 34 20 15 15 26 19 19 15 13 12 18 15 15 18 28 15 21 21 30 36 39 37 43 30 28 28 24 23 18 12 13 13 13 12 29 29 12 12 20 12 18 18 18 18 20 30 25 18 18 20 32 28 28 13 13 13 12 16 20 11 11 11 16 16 25 32 32 28 18 18 11 11 11 23 25 23 23 17 24 26 28 28 22 18 15 26 21 21 11 11 11 15 9 9 9 9 10 10 11 11 9 9 10 17 16 24 19 11 11 12 18 12 14 14 23 18 12 12 11 8 8 6 6 6 11 14 22 24 8 8 8 8 9 10 12 11 11 12 13 9 8 8 15 8 9 14 11 14 10 9 11 8 10 11 10 11 12 11 11 9 9 9 8 8 8 10 10 10 10 10 13 15 23 24 19 14 13 12 12 12 18 13 11 10 9 9 9 12 12 9 9 7 10 8 8 8 8 8 9 9 8 8 8 12 15 18 9 8 7 6 8 6 10 10 10 8 8 8 8 8 8 11 11 10 8 8 6 6 7 7 14 10 10 8 8 8 7 9 9 9 7 7 8 8 8 8 10 11 13 15 14 10 11 11 8 8 8 8 8 8 8 6 6 8 7 6 8 8 7 7 8 10 8 8 8 8 8 8 8 10 8 8 8 8 8 8 8 9 8 8 9 8 11 8 8 8 8 12 11 13 16 19 29 22 23 20 18 15 11 11 8 8 10 9 9 9 9 9 11 12 11 10 10 9 15 7 7 7 8 8 8 8 8 8 11 15 10 11 8 10 8 8 10 8 8 8 8 8 8 8 8 10 17 13 11 10 6 6 6 6 8 6 6 8 7 6 6 6 6 7 7 6 6 10 8 8 6 8 6 10 8 8 6 6 8 8 10 10 12 8 11 9 9 8 8 10 10 10 6 6 6 6 6 6 8 8 9 13 8 8 8 8 8 9 8 8 8 8 10 9 9 9	Open. Hide. 9 13 9 9 9 11 27 32 39 31 31 35 32 36 36 37 44 37 39 44 21 21 9 9 12 10 14 14 19 20 20 22 19 22 22 19 29 39 22 23 25 31 31 31 44 50 50 50 50 30 26 10 15 10 11 8 8 9 12 9 13 22 24 28 28 33 33 36 44 57 57 57 53 53 53 53 53 57 43 43 42 48 48 47 57 57 68 68 68 68 68 54 54 47 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 48 48 48 48 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 68 68 68 68 57 57 57 57 57 57 50 50 50 50 50 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 59 59 59 59 57 59 57 68 68 68 68 68 68 68 57 57 57 57 54 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 59 47 34 34 16 16 11 11 9 9 9 11 9 18 15 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 3 17 17 24 11 11 7 7 7 6 6 6 6 3 0 0 0 3 7 8 7 7 9 9 9 9 9 11 11 10 9 3 0 3 8 10 11 9 9 9 10 9 10 3 0 3 8 8 8 3 0 3 8 8 11 10 9 10 10 10 10 10 8 8 8 8 6 6 8 6 9 9 9 9 9 9 10 10 10 9 9 9 9 9 9 10 8 10 10 13 15 10 12 10 10 8 8 10 10 16 13 10 9 8 8 6 6 6 6 6 8 9 11 15 14 8 8 8 8 8 8 9 9 9 8 8 8 8 8 8 8 8 8 9 13 15 13 11 11 10 9 9 8 8 10 10 8 10 11 11 11 11 11 11 21 10 8 8 8 8 11 16 28 29 13 14 13 6 6 6 8 8 10 10 10 13 10 11 8 8 8 13 11 9 9 8 10 8 8 8 8 8 8 8 8 8 8 8 8 6 8 6 6 8 10 8 8 10 13 12 8 8 11 10 15 15 16 11 8 11 8 8 6 6 8 10 13 13 8 8 8 8 9 11 10 8 8 10 8 10 8 12 11 9 15 12 13 10 10 11 14 14 13 13 8 10 8 8 11 12 21 15 11 10 10 10 10 10 10 11 10 8 8 7 8 11 10 12 8 8 10 9 10 10 12 12 14 22 19 13 13 13 11 10 10 10 8 8 8 11 8 8 8 9 13 19 13 15 9 9 9 10 13 10 9 9 9 8 8 9 16 15 16 22 15 15 9 9 9 10 8 8 8 13 13 13 12 12 15 15 13 13 11 8 9 9 13 10 15 13 3 0 3 13 13 8 8 7 7 8 8 8 6 6 8 8 8 12 10 15 10 16 9 9 9 9 8 10 10 10 16 15 21 14 13 13 13 13 18 16 15 13 12 9 9 11 13 15 17 10 6 6 6 8 8 3 0

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no396_i22.g1 MSMg01no396_i22.g1 CHROMAT_FILE:
MSMg01no396_i22.g1 PHD_FILE: MSMg01no396_i22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:43 2005
         (250 letters)



>mm_chr10_118047160_118047809
          Length = 650

 Score =  426 bits (220), Expect = e-124
 Identities = 242/250 (96%), Gaps = 2/250 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aggtataaatgagggatacagcggggagctcacaaacgtctctgaaatgggaaactgtgg 60
           ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aggtatagacgagggatacagcggggagctcacaaacgtctctgaaatgggaaacagtgg 260

                                                                       
Query: 61  ttcaaatcattccacggttggtgctgaaccttcccatggtgatcatatgccaaaatgtcc 120
           |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 261 ttcaaatcattccacggttggtgccgaaccttcccacggtgatcatatgccaaaatgtcc 320

                                                                       
Query: 121 cctgtcagggctgactgataacctcaaagatcctggaatggcctactgggtttaatctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctgtcagggctgactgataacctcaaagatcctggaatggcctactgggtttaatctgg 380

                                                                       
Query: 181 cttttgccaacaatgagtgcgctctggcagaggcatgtgcagacgtgtgtgtgtgtgtgt 240
           |||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 381 cttttgccaacactgagtgcgctctggcagaggcatgtgcag--gtgtgtgtgtgtgtgt 438

                     
Query: 241 gtgtgtgtgt 250
           ||||||||||
Sbjct: 439 gtgtgtgtgt 448


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space:   154481
Effective search space used:   154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information