Query= MSMg01no396_l02.b1 MSMg01no396_l02.b1 CHROMAT_FILE:
MSMg01no396_l02.b1 PHD_FILE: MSMg01no396_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:53 2005
(270 letters)
>mm_chr10_72695651_72696319
Length = 669
Score = 484 bits (250), Expect = e-141
Identities = 259/262 (98%), Gaps = 1/262 (0%)
Strand = Plus / Plus
Query: 3 gaattcctgccctctctgcttttgatggtgaactgttgtatagaactttgaacaaaataa 62
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattcctgccctcactgcttttgatggtgaactgttgtatagaactttgaacaaaataa 262
Query: 63 gccctttcctccctcagttgcttttgctcatggtgtttcatcacagcaatagtaacctga 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gccctttcctccctcagttgcttttgctcatggtgtttcatcacagcaatagtaacctga 322
Query: 123 attaatgtactttcctagtgactcagaataaaaaaaaatgtaatgggatggatgaattat 182
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 323 attaatgtactttcctagtgactcagaataaaaaaaa-tgtaatgggatggatgaattat 381
Query: 183 ctagggaggtagtgagcttatactcataatcactggtgtggcagatttctggagacttgt 242
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 382 ctagggaggtagtgagcttatactcataatcactggtgtggcagatttatggagacttgt 441
Query: 243 cacagcaatgtttttttttttt 264
||||||||||||||||||||||
Sbjct: 442 cacagcaatgtttttttttttt 463
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 669
Length adjustment: 9
Effective length of query: 261
Effective length of database: 660
Effective search space: 172260
Effective search space used: 172260
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no396_l02.g1 MSMg01no396_l02.g1 CHROMAT_FILE:
MSMg01no396_l02.g1 PHD_FILE: MSMg01no396_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:53 2005
(461 letters)
>mm_chr10_72869809_72870670
Length = 862
Score = 837 bits (433), Expect = 0.0
Identities = 454/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1 ttccctataaacaggagaatctgaagattcacaggagtctcctaaaaacaccaatataca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ttccctataaacaggagaatctgaagattcacaggagtctcctaaaaacaccaatataca 602
Query: 61 tcctgattttattttaatatctgaactatagagaaaaattccccacttgaatctttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcctgattttattttaatatctgaactatagagaaaaattccccacttgaatctttcttt 542
Query: 121 attcatagggtaaaactgtactgaaatgaaggctttcatggaaaatgattgcatgaaaag 180
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 541 attcatagggtgaaactgtactgaaatgaaggttttcatggaaaatgattgcatgaaaaa 482
Query: 181 catatcctatcatgattatagctcccaagacagaatgttcattatttggttttagataat 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 caaatcctatcatgattatagctcccaagacagaatgttcattatttggttttagataat 422
Query: 241 tgttaagtcttactattctcatcccctgttctttctcatgctatttgaacaagaggaaat 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgttaagtcttacaattctcatcccctgttctttctcatgctatttgaacaagaggaaat 362
Query: 301 gatgctatgacctgtctatttattcttgtttgatgtacagagcccaactttcaaggggaa 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 361 gatgctatgacctgtctatttattcttgtttgatgtacagagtccaactttcaaggggaa 302
Query: 361 acacagatgtgttgatatctggaaagattatctatgagcttc-ttttttcgggtataatt 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 301 acacagatgtgttgatatctggaaagattatctatgagcttctttttttcgggtataatt 242
Query: 420 gtgtcattcattacatatttattacgtgataattatattgg 460
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgtcattcattacatatttattacgtgataattatattgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 862
Length adjustment: 10
Effective length of query: 451
Effective length of database: 852
Effective search space: 384252
Effective search space used: 384252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
