NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAACATCCGC
GGAATTCATTAAGTATTCAAGAGAAGAAACTCTAGGCGACTGATGAGATA
CCAAACAAATCAAACAAACTGATAAGAAAATTCAACAACCATGAACTCCA
CTTTGAAATTTGTGTTTAATGTTGATTTTCAGAATTTCAATTATTTTTAT
ATTTCAATTGTTTTTCCATAACTGTTCAATCTATAATTTTTAAAAGTATG
ACAAATGAAGACCTTAGAACTATTAATGCTTCCCTGTGCACAAATTTAAT
CAACTCGTGTCACTGACAAATGATACCTCAATAACAGTCAGGCTAAGGGT
GAATCCTTTGCTCGTGGTCATAACCCATCCCAGGTCACTATGCAGTTTCC
CTGGAAGTCTCAGAAACTGCTGTATGCCTTTTGTTCAAAGTTCACGATAC
AGCACACAGATGTGTTGATTAAAAAAAAAAAACCCTGTTAACATGTATAA
AATTATCTCTTTTAGGTCACATCTTATTTCTGTTCCATGTGTGATGTGAA
AAGAAATGACTTAAGTTTCTTAGGATATTGTGTTGCCAATTTTTAGACAT
TTACGTTTTGCTTTATAAAAAAACTTAAAGAGCTTGCTGCAGTTGTCCCG
GATCTGAGGGCAAGGAAAATGATTTTCTCAAAATCCCCTGGTTTTTCGAA
AGAAAGCCACTGGGGGAAGCATAGTGAAGGGGGTTTTGCCTCCCATCCCC
CTTTTTTTTTATATT

CATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATTGTAATACAAGAGTCAGAGTTGG
GTGGAGCGATGTCCTCTGCAGGAAAAACATGGAGAAGCACTGGTGTTTTA
TGCTTATTCCTCAGCTGTAAACTCCTGCAGTGACTTGATGAGCCAGGGTG
GGTTGATGCCCAGGCGGCCCTGCTCCCCATTAGAAGAGAAGCAGAGGGAG
CATGGGTGGGGTGGTGTAAGGCGGGGGTTGGNAGNNTATATNTTTCTTTT
NTTTTCCTTCCNCCCCTTTTTTTTTTTTCNCCCCCCNNCCCCNCCCCCCT
CCCCTTTTCTTTTTCCCCCCCCTCCCTTTTTTCCTCTTTTTATCCCTCTC
CCTCTCCTTTTCTCTCCCCCCCCTCTTTCCCTCTCTCCTTCTCCTCCTCC
CCTCCTCCGCCCTTTTTCACCCCCTATCCATTCCTCTTTCACTTTTTCGT
TTACTTTATTTCTTCCCCCACTTTTTTCCCCCTTCCTTCTTTTCTCTTCT
CGTTTACTTCCCTTCTTCCCCTCCCCTTGTTACCTGCCCTTCTCCATTCA
TATCCTTTCTTCTTCTTCTCTTTTTTAGTCCTCTCATTCACATTTCGTCT
TATTCTTTCTTTCATCATTTTTATTGTTCTGTTTATTGTCTGCTTGATGT
CTTCCCCTCTTTTTTTATCCACCATCTCCCCTCTCCTTCTCCTCTTCTCC
TCCTTTTCTCATCACCCCTCTCTCTCTTAATTTCCCTTCCTCTCATCTAA
ATTCCGTTCTCTCCCCGCCTCCGCTCTCTCGTATTCTTCTTAATATTCGT
CTTCCATCTCTTTTATATCTTTCTCTCTTCN

Query= MSMg01no397_a09.b1 MSMg01no397_a09.b1 CHROMAT_FILE:
MSMg01no397_a09.b1 PHD_FILE: MSMg01no397_a09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:09:18 2005
         (494 letters)



>mm_chr10_106317760_106318653
          Length = 894

 Score =  876 bits (453), Expect = 0.0
 Identities = 489/513 (95%), Gaps = 19/513 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaaactctaggcgactgatgagataccaaacaaatcaaacaaactgataagaaaattca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaaactctaggcgactgatgagataccaaacaaatcaaacaaactgataagaaaattca 260

                                                                       
Query: 61  acaaccatgaactccactttgaaatttgtgtttaatgttgattttcagaatttcaattat 120
           ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 261 acaaccatgaactccactttgaaatttgtgttttatgttgattttcagaatttctattat 320

                                                                       
Query: 121 ttttatatttcaattgtttttccataactgttcaatctataatttttaaaagtatgacaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttatatttcaattgtttttccataactgttcaatctataatttttaaaagtatgacaa 380

                                                                       
Query: 181 atgaagaccttagaactattaatgcttccctgtgcacaaatttaatcaactcgtgtcact 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 atgaagaccttagaactattaatgcttccctgtgcacaaatttaatcaactcatgtcact 440

                                                                       
Query: 241 gacaaatgatacctcaataacagtcaggctaagggtgaatcctttgctcgtggtcataac 300
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gacaaatgatacctcaatcacagtcaggctaagggtgaatcctttgctcgtggtcataac 500

                                                                       
Query: 301 ccatcccaggtcactatgcagtttccctggaagtctcagaaactgctgtatgccttttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccatcccaggtcactatgcagtttccctggaagtctcagaaactgctgtatgccttttgt 560

                                                                       
Query: 361 tcaaagttcacgatacagcacacagatgtgttgattaaaaaaaaaaaa------------ 408
           ||||||||||| ||||||||||||||||||||||||||||||||||||            
Sbjct: 561 tcaaagttcacaatacagcacacagatgtgttgattaaaaaaaaaaaaaacaaaaaaaaa 620

                                                                       
Query: 409 -------ccctgttaacatgtataaaattatctcttttaggtcacatcttatttctgttc 461
                  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaaaaaccctgttaacatgtataaaattatctcttttaggtcacatcttatttctgttc 680

                                            
Query: 462 catgtgtgatgtgaaaagaaatgacttaagttt 494
           |||||||||||||||||||||||||||||||||
Sbjct: 681 catgtgtgatgtgaaaagaaatgacttaagttt 713


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 494
Length of database: 894
Length adjustment: 10
Effective length of query: 484
Effective length of database: 884
Effective search space:   427856
Effective search space used:   427856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)