Query= MSMg01no397_j21.b1 MSMg01no397_j21.b1 CHROMAT_FILE:
MSMg01no397_j21.b1 PHD_FILE: MSMg01no397_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:06 2005
(413 letters)
>mm_chr10_123085147_123085957
Length = 811
Score = 659 bits (341), Expect = 0.0
Identities = 377/389 (96%), Gaps = 2/389 (0%)
Strand = Plus / Minus
Query: 5 gaattctcaacaaattccgcctttccattagtttcttctaccccccttagctacccacac 64
|||||||||||||| | || ||||||||||||||||||| |||| ||||||||||||||
Sbjct: 591 gaattctcaacaaaaactgcttttccattagtttcttcta-ccccattagctacccacac 533
Query: 65 ctcttactgtgtccagaatgtcatttacttagatgagtgatggcttggtgacagtgtata 124
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 cttttactgtgtccagaatgtcatttacttagatgagtgatggcttggtgacagtgtata 473
Query: 125 cttcctgttcagtggcacagatgttcataaaatggtagaacagatgtggttagtggatgc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 cttcctgttcagtggcacagatgttcataaaatggtagaacagatgtggttagtggatgc 413
Query: 185 cagaaactcataatatcatgtcatatgccaacattaagcctgtcttaacatatccaaaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 cagaaactcataatatcatgtcatatgccaacattaagcctgtcttaacatatccaaaca 353
Query: 245 tgtgaaaatataagttgaggctaactaagtgatccgatatctactcccttgttaatgttc 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 352 tgtgaaaatataagttgaggctaactaagtgatccga-atctactcccttgttaatgttc 294
Query: 305 acttaactgtaagtagtgatgatatgtgtactccactgtgacagaaaatcttgactggtg 364
|||||||| |||||||||||| |||||||| ||||||||||||| |||||||||||||||
Sbjct: 293 acttaactataagtagtgatggtatgtgtattccactgtgacagcaaatcttgactggtg 234
Query: 365 acacaccttggaagacagaaccccaattg 393
|||||||||||||||||||||||||||||
Sbjct: 233 acacaccttggaagacagaaccccaattg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 811
Length adjustment: 9
Effective length of query: 404
Effective length of database: 802
Effective search space: 324008
Effective search space used: 324008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no397_j21.g1 MSMg01no397_j21.g1 CHROMAT_FILE:
MSMg01no397_j21.g1 PHD_FILE: MSMg01no397_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:06 2005
(337 letters)
>mm_chr10_122901238_122901974
Length = 737
Score = 598 bits (309), Expect = e-175
Identities = 330/337 (97%)
Strand = Plus / Plus
Query: 1 ctgaaggcaaacacaaaccatatcgcaaaatggtaagttgcaaggttaaacagaagccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 ctgaaggcaaacacaaaccatatcgcaaaatggtaagttgcaaggttaaacagaagctgg 260
Query: 61 aatatacaggattccttaggtgtttcagatagtcacctatggaattttttgttgattggc 120
||||||||||||| |||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 261 aatatacaggattacttaggtgtttcagatagtcacctatgggattttttattgattggc 320
Query: 121 ctggagctcagaacacagcatatctttatgcactagctgatatctgatttatcaatagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctggagctcagaacacagcatatctttatgcactagctgatatctgatttatcaatagtg 380
Query: 181 attacatgaatgaatggcctgatcttgatatttagagagccatactcttgtaacttcacc 240
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attgcatgaatgaatggcctgatcttgatatttagagagccatactcttgtaacttcacc 440
Query: 241 ttagctcatttatttatgcaagacagttaaaccttttgtcttcagttactgcatctagca 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttagctcatttagttatgcaagacagttaaaccttttgtcttcagttactgcatctagca 500
Query: 301 tgtgtagatactagcatttgagcaatcatctcaggat 337
||||||||||||| |||||||||||||||||||||||
Sbjct: 501 tgtgtagatactaacatttgagcaatcatctcaggat 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
