Query= MSMg01no398_f03.b1 MSMg01no398_f03.b1 CHROMAT_FILE:
MSMg01no398_f03.b1 PHD_FILE: MSMg01no398_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:01 2005
(519 letters)
>mm_chr10_105093345_105094264
Length = 920
Score = 982 bits (508), Expect = 0.0
Identities = 517/520 (99%), Gaps = 1/520 (0%)
Strand = Plus / Plus
Query: 1 attaaaagggagaattgacagattctgtgtcgatgggtagatggagaaatgtttgagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attaaaagggagaattgacagattctgtgtcgatgggtagatggagaaatgtttgagaaa 260
Query: 61 caaattagagttaatactcaggttccaacttacacagctttgacgagcacagccctcctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaattagagttaatactcaggttccaacttacacagctttgacgagcacagccctcctt 320
Query: 121 caccccccc-actcccccgaaaaaagctcttccgagaggaggacaacaaatttggctttt 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccccccccactcccccgaaaaaagctcttccgagaggaggacaacaaatttggctttt 380
Query: 180 taacaggctgagcttatataacaggtagaatatctaagagcaagtataagctctgctagg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taacaggctgagcttatataacaggtagaatatctaagagcaagtataagctctgctagg 440
Query: 240 aataaagaagtttatagctttcttaaagaaaagagctataaggactccatgtctataggg 299
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataaagaagcatatagctttcttaaagaaaagagctataaggactccatgtctataggg 500
Query: 300 tcaaatagtttttaaacttctaccactcatcttcttgacgagtgcaagccagtagttcaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcaaatagtttttaaacttctaccactcatcttcttgacgagtgcaagccagtagttcaa 560
Query: 360 actttctcatgattcttgaatctttcagtgcatactttgctatggagcttaataacagca 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 actttctcatgattcttgaatctttcagtgcatactttgctatggagcttaataacagca 620
Query: 420 taagcatggtttcagttggcatgattccagctaccaagattatggagttaaaaatatatc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taagcatggtttcagttggcatgattccagctaccaagattatggagttaaaaatatatc 680
Query: 480 cccacaggcctttcacacatcagctgtctcacaagcacca 519
||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cccacaggcctttcacacatcagctgtctcacaagcacca 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 920
Length adjustment: 10
Effective length of query: 509
Effective length of database: 910
Effective search space: 463190
Effective search space used: 463190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_f03.g1 MSMg01no398_f03.g1 CHROMAT_FILE:
MSMg01no398_f03.g1 PHD_FILE: MSMg01no398_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:01 2005
(244 letters)
>mm_chr10_105238978_105239621
Length = 644
Score = 431 bits (223), Expect = e-125
Identities = 238/243 (97%)
Strand = Plus / Minus
Query: 1 tctgttgcctcaagaaaagtcccttccctataccacaagactctgcctcactactgtgaa 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 319 tctgttgcctcaagaaaagtcccttccctataccacaagactctgccttactactgtcag 260
Query: 61 tctcaggagtaatcccatcagaccttacatcccatcccagaccgtaacaccccatcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 259 tctcaggagtaatcccatcagaccttacatcccatcccagaccgtaacaccccgtcttta 200
Query: 121 gcggggtgtcgtgactcacacttttaaaacccagcacttaaaaggctgatgcaagggatg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 199 gcggggtgtcgtgactcacacttttaaaacccagcacttaaaaggctgatgcaagggaag 140
Query: 181 ctctgaaagtccaatgcaatcctggactctatagtgagttccaggacagccagagccata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 ctctgaaagtccaatgcaatcctggactctatagtgagttccaggacagccagagccata 80
Query: 241 gag 243
|||
Sbjct: 79 gag 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
