Query= MSMg01no398_i21.b1 MSMg01no398_i21.b1 CHROMAT_FILE:
MSMg01no398_i21.b1 PHD_FILE: MSMg01no398_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:19 2005
(500 letters)
>mm_chr10_106916421_106917320
Length = 900
Score = 949 bits (491), Expect = 0.0
Identities = 499/503 (99%), Gaps = 3/503 (0%)
Strand = Plus / Plus
Query: 1 taagttacacagagataaaaactcctgactagtcccatcaccaaaagaagtgggttaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagttacacagagataaaaactcctgactagtcccatcaccaaaagaagtgggttaact 260
Query: 61 tcctctttctcactcttgcctggctttataacctgttttactgagagaattatagtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctctttctcactcttgcctggctttataacctgttttactgagagaattatagtttgg 320
Query: 121 atgtacaaaggcccccacaatctcatatgttggaacactagtatttcagaaggtggtgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtacaaaggcccccacaatctcatatgttggaacactagtatttcagaaggtggtgcc 380
Query: 181 actagttgggaagatcatgggctctttaaggggtgaggcttcctggaggaagtgtgctac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagttgggaagatcatgggctctttaaggggtgaggcttcctggaggaagtgtgctac 440
Query: 241 cagaggcgggccttgtgctttggaatctagtccgatttcctgctcattcttagcttccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagaggcgggccttgtgctttggaatctagtccgatttcctgctcattcttagcttccag 500
Query: 301 agaatcaatgagaccagctaccttcttctcttgctaccgtgctgatccatccatgataaa 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaatcaatgagaacagctaccttcttctcttgctaccgtgctgatccatccatgataaa 560
Query: 361 gtataaaccaaaataaacacttcctttctcactttccttcttgttcaatatttttgttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtataaaccaaaataaacacttcctttctcactttccttcttgttcaatatttttgttgt 620
Query: 421 tgttggtacagcagtaagacgagtaactagttcagaaaatacagcagaaatattgttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgttggtacagcagtaagacgagtaactagttcagaaaatacagcagaaatattgttttt 680
Query: 481 tttt---atagtcaagttataag 500
|||| ||||||||||||||||
Sbjct: 681 tttttttatagtcaagttataag 703
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 900
Length adjustment: 10
Effective length of query: 490
Effective length of database: 890
Effective search space: 436100
Effective search space used: 436100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_i21.g1 MSMg01no398_i21.g1 CHROMAT_FILE:
MSMg01no398_i21.g1 PHD_FILE: MSMg01no398_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:19 2005
(463 letters)
>mm_chr10_107082428_107083291
Length = 864
Score = 832 bits (430), Expect = 0.0
Identities = 448/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 1 atgaatgaattttcaattgtctttgtgtcaaacataacaaaatatctgtttttaattaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgaatgaattttcaattgtctttgtgtcaaacataacaaaatatctgtttttaattaaa 395
Query: 61 agagcgttttgtagacagcttcttcagtatcctgttcatgctgaacgttc-aaaacctat 119
||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||
Sbjct: 394 agagcgttttgtagacagcttcttcagaatcctgttcatgctgaacgttcaaaaaactat 335
Query: 120 gatgtctattcaaacacttgatacaatttttttgttgttgtttatttcagtttcagtttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gatgtctattcaaacacttgatacaatttttttgttgttgtttatttcagtttcagtttt 275
Query: 180 tggaatgcaatggaaagtggattgctgcccatttcccacgtggcttccgcttctcttttg 239
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 274 tggaatgcaatggaaagtggattgctgcccatttcccacgtggcttctgcttctcttttg 215
Query: 240 tttattattaaagatttatttcttttgcctatgggggttttgcctgcatgtatgtcactg 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 tttaatattaaagatttatttcttttgcctatgggggttttgcctgcatgtatgtcactg 155
Query: 300 cattgggtgattgaagttgaggccagaagaggacatggaacccccaccccctccccacaa 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 154 cattgggtgattgaagttgaggccagaaaaggacatggaacccccaccccctccccacaa 95
Query: 360 gagttgcagaagtttgtgagccatcatatggttccagggaactgaacccaggtcctctgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gagttgcagaagtttgtgagccatcatatggttccagggaactgaacccaggtcctctgg 35
Query: 420 aagagcagcaagtgctcttaactgctgagccatc 453
||||||||||||||||||||||||||||||||||
Sbjct: 34 aagagcagcaagtgctcttaactgctgagccatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 864
Length adjustment: 10
Effective length of query: 453
Effective length of database: 854
Effective search space: 386862
Effective search space used: 386862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
