Query= MSMg01no398_p21.b1 MSMg01no398_p21.b1 CHROMAT_FILE:
MSMg01no398_p21.b1 PHD_FILE: MSMg01no398_p21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:53 2005
(527 letters)
>mm_chr10_127971166_127972092
Length = 927
Score = 980 bits (507), Expect = 0.0
Identities = 522/527 (99%)
Strand = Plus / Minus
Query: 1 ggatagctctactcacaatgggctagaccctcccccactgatcactaagtaagaaaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 ggatagctctactcacaatgggctagaccctcccccactgatcactaagtaagaaaatgt 605
Query: 61 cctgcaactgggtcttatagtggcattttctcaattgaggctccatcctctgatgactct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 cctgcaactgggtcttatagtggcattttctcaattgaggctccatcctctgatgactct 545
Query: 121 aatttggggcaggtttgacataaaacaagtcagttcaccaggcaagcactccactcactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 aatttggggcaggtttgacataaaacaagtcagttcaccaggcaagcactccactcactc 485
Query: 181 ttccctgtcagtttgatcagagaagtcatggacccatcagagttggggctccaaccagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttccctgtcagtttgatcagagaagtcatggacccatcagagttggggctccaaccagca 425
Query: 241 tatgttctgttgagaggaggatcaccacagagggaatgtcctactgtcttcaagggaagc 300
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 tatgttctgcagagaggaggatcaccacagagggaatgtcctactgtcttcaagggaagc 365
Query: 301 catgtggtcagtgaaaggacaggaaccagaaacacccaagaccaagttctcaacgcaaag 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 364 catgtggtcagtgaaaggacaggaaccagaaacacccaagaccaagttctcaacacaaag 305
Query: 361 gagatttattttttattttgtaaaatatgttatcttttttttattagatattttctttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gagatttattttttattttgtaaaatatgttatcttttttttattagatattttctttac 245
Query: 421 ttacatttcaaatgctatcctgaaagttccctgtaccctcaccccgccctgctcccctac 480
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 244 ttacatttcaaatgctatcctgaaagttccctgtaccctcaccctgccctgctcccctac 185
Query: 481 ctacccactcccacttcttggccctggcattcccctgtactggggca 527
|||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 184 ctacccacccccacttcttggccctggcattcccctgtactggggca 138
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_p21.g1 MSMg01no398_p21.g1 CHROMAT_FILE:
MSMg01no398_p21.g1 PHD_FILE: MSMg01no398_p21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:11:53 2005
(243 letters)
>mm_chr10_127795514_127796156
Length = 643
Score = 451 bits (233), Expect = e-131
Identities = 242/247 (97%), Gaps = 4/247 (1%)
Strand = Plus / Plus
Query: 1 cactctgtagacactggcctcagactcataaagaactgcctgcctctgcttcc----caa 56
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 197 cactctgtagacactggcctcagactcataaagaactgcctgcctctgcttccttcccaa 256
Query: 57 gggctaggattaaaggcatgtgccactatgcccagcaatgggagctaggtattggggtat 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gggctaggattaaaggcatgtgccactatgcccagcaatgggagctaggtattggggtat 316
Query: 117 gtttcaaaaaaaacaaaaacaaaacaacttcttaaagttagtcagggaacacagggtctg 176
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gtttcaaaaaaaacaaaaacaaaacaacttcttaaagttagtcagggaacacagggtctg 376
Query: 177 tagcaaatgggaagaaacatcttgaaagggttgaaactaggtaagaaatgaggaaagaaa 236
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 377 tagcaaatgggaagaaacatcttgaaagggttgaaactaggtaagaaataaggaaagaaa 436
Query: 237 gctgaaa 243
|||||||
Sbjct: 437 gctgaaa 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
